RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 NOMO1Q15155 1222 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 EFHC2Q5JST6 749 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 BTBD8Q5XKL5 378 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 KAZNQ674X7 775 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 C19orf48Q6RUI8 117 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 PRSS55Q6UWB4 352 aaPredicted RBP12.32□□□□□ -0.44
GGA3-217ENST00000583667 MTSS1LQ765P7 747 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 BZW1Q7L1Q6 419 aaKnown RBP12.32□□□□□ -0.44
GGA3-217ENST00000583667 FAM131BQ86XD5 332 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 RFX6Q8HWS3 928 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 ALLCQ8N6M5 410 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 CCDC185Q8N715 623 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 BBOF1Q8ND07 529 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 SLC7A14Q8TBB6 771 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 ACTL9Q8TC94 416 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 ATG4AQ8WYN0 398 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 ART4Q93070 314 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 MYRFLQ96LU7 910 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 BBC3Q96PG8 261 aaPredicted RBP12.32□□□□□ -0.44
GGA3-217ENST00000583667 CSPG4P5Q96PW8 444 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 HAPLN3Q96S86 360 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 PRKD2Q9BZL6 878 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 FOXP3Q9BZS1 431 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 TSPYL1Q9H0U9 437 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 CRISPLD1Q9H336 500 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 DHX35Q9H5Z1 703 aaKnown RBP12.32□□□□□ -0.44
GGA3-217ENST00000583667 WDCPQ9H6R7 721 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 NMUR1Q9HB89 426 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 OLA1Q9NTK5 396 aaKnown RBP12.32□□□□□ -0.44
GGA3-217ENST00000583667 ARHGEF38Q9NXL2 777 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 GRHL1Q9NZI5 618 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 CWC15Q9P013 229 aaKnown RBP12.32□□□□□ -0.44
GGA3-217ENST00000583667 DNPEPQ9ULA0 475 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 CDH7Q9ULB5 785 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 NFU1Q9UMS0 254 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 RAD54BQ9Y620 910 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 BCLAF3A2AJT9 711 aaKnown RBP12.31□□□□□ -0.44
GGA3-217ENST00000583667 CFAP69A5D8W1 941 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 H3BRJ5 948 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 APOL1O14791 398 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 ADAM12O43184 909 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 IRAK2O43187 625 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 ADH1AP07327 375 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 SLC2A3P11169 496 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 ARL4AP40617 200 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 CCR3P51677 355 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 OTUD4Q01804 1114 aaKnown RBP12.31□□□□□ -0.44
GGA3-217ENST00000583667 SATB1Q01826 763 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 MMRN1Q13201 1228 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 CASP8Q14790 479 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 LLGL1Q15334 1064 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 TRADDQ15628 312 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 ZDHHC24Q6UX98 284 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 TCEAL8Q8IYN2 117 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 PDZD8Q8NEN9 1154 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 ADAM32Q8TC27 787 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 IFT81Q8WYA0 676 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 P3H4Q92791 437 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 RTP4Q96DX8 246 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 TRMT2BQ96GJ1 504 aaKnown RBP12.31□□□□□ -0.44
GGA3-217ENST00000583667 SLC39A13Q96H72 371 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 C1orf74Q96LT6 269 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 SERPINB11Q96P15 392 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 PGLYRP2Q96PD5 576 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 KCTD15Q96SI1 283 aaPredicted RBP12.31□□□□□ -0.44
GGA3-217ENST00000583667 CDK5RAP1Q96SZ6 601 aaKnown RBP12.31□□□□□ -0.44
GGA3-217ENST00000583667 TRIM51Q9BSJ1 452 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 TLR8Q9NR97 1041 aaKnown RBP12.31□□□□□ -0.44
GGA3-217ENST00000583667 HEBP1Q9NRV9 189 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 DDIT4Q9NX09 232 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 ZNF148Q9UQR1 794 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 GPSM3Q9Y4H4 160 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 ADAMTS20P59510 1910 aa12.31□□□□□ -0.44
GGA3-217ENST00000583667 A0A1W2PQH9 124 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 ESYT3A0FGR9 886 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 SLC38A8A6NNN8 435 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 KCNU1A8MYU2 1149 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 SMAPO00193 183 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 MCF2LO15068 1137 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 TP73O15350 636 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 SEC31AO94979 1220 aaKnown RBP12.3□□□□□ -0.44
GGA3-217ENST00000583667 URODP06132 367 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 CCR1P32246 355 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 HSPA9P38646 679 aaKnown RBP12.3□□□□□ -0.44
GGA3-217ENST00000583667 RPL21P46778 160 aaKnown RBP12.3□□□□□ -0.44
GGA3-217ENST00000583667 CXCL12P48061 93 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 PPP3CCP48454 512 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 KPNA1P52294 538 aaPredicted RBP12.3□□□□□ -0.44
GGA3-217ENST00000583667 ARPP19P56211 112 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 USP46P62068 366 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 NME3Q13232 169 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 SNX1Q13596 522 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 DPYSQ14117 519 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 PAFAH1B3Q15102 231 aaKnown RBP12.3□□□□□ -0.44
GGA3-217ENST00000583667 PPP1R7Q15435 360 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 MGAT5BQ3V5L5 792 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 KLHDC10Q6PID8 442 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 RHBDF2Q6PJF5 856 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 C4orf22Q6V702 233 aa12.3□□□□□ -0.44
GGA3-217ENST00000583667 RTL10Q7L3V2 364 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms