RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 RAP1GAP2Q684P5 730 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 NAPEPLDQ6IQ20 393 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 LRRC69Q6ZNQ3 347 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 LGI2Q8N0V4 545 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 SNIP1Q8TAD8 396 aaKnown RBP16.7■□□□□ 0.26
SREBF1-221ENST00000583080 NRSN2Q9GZP1 204 aa16.7■□□□□ 0.26
SREBF1-221ENST00000583080 RTN2O75298 545 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 FBXO21O94952 628 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 ZNF202O95125 648 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 MAT2AP31153 395 aaKnown RBP16.69■□□□□ 0.26
SREBF1-221ENST00000583080 RXRGP48443 463 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 NNTQ13423 1086 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 CNGA2Q16280 664 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 SLC45A4Q5BKX6 768 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 SYPL2Q5VXT5 272 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 RNF219Q5W0B1 726 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-221ENST00000583080 ANKRD40Q6AI12 368 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-221ENST00000583080 CHSY1Q86X52 802 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 CIR1Q86X95 450 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-221ENST00000583080 CCDC117Q8IWD4 279 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-221ENST00000583080 FAM149B1Q96BN6 582 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 HSFY1Q96LI6 401 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 ERVMER34-1Q9H9K5 563 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 ARHGAP20Q9P2F6 1191 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 CA5BQ9Y2D0 317 aa16.69■□□□□ 0.26
SREBF1-221ENST00000583080 ASH1LQ9NR48 2969 aaKnown RBP16.69■□□□□ 0.26
SREBF1-221ENST00000583080 DOCK9Q9BZ29 2069 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 TBC1D3DA0A087WVF3 549 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 TBC1D3IA0A087WXS9 549 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 TBC1D3EA0A087X179 549 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 TBC1D3KA0A087X1G2 549 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 A0A1W2PQ27 194 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 A0A1W2PQ64 194 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 TBC1D3FA6NER0 549 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-221ENST00000583080 TBC1D3LB9A6J9 549 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 RRP8O43159 456 aaKnown RBP16.68■□□□□ 0.26
SREBF1-221ENST00000583080 MOCS3O95396 460 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 TBC1D3HP0C7X1 549 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 PDGFRAP16234 1089 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 CKMT2P17540 419 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 TACR2P21452 398 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 FMO5P49326 533 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 PITX1P78337 314 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-221ENST00000583080 INSM1Q01101 510 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-221ENST00000583080 ELAVL3Q14576 367 aaKnown RBP16.68■□□□□ 0.26
SREBF1-221ENST00000583080 ZC3H12AQ5D1E8 599 aaKnown RBP16.68■□□□□ 0.26
SREBF1-221ENST00000583080 TBC1D3GQ6DHY5 549 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 TBC1D3CQ6IPX1 549 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 TBC1D3Q8IZP1 549 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-221ENST00000583080 PPM1KQ8N3J5 372 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 FAM131CQ96AQ9 280 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 NT5C1BQ96P26 610 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 TSG101Q99816 390 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 CAAP1Q9H8G2 361 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 ARMCX3Q9UH62 379 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-221ENST00000583080 CYTH4Q9UIA0 394 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 SARDHQ9UL12 918 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 CFAP46Q8IYW2 2715 aa16.68■□□□□ 0.26
SREBF1-221ENST00000583080 ZNF462Q96JM2 2506 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 TK2O00142 265 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 TRIM38O00635 465 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 GLDCP23378 1020 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 FKBP3Q00688 224 aaKnown RBP16.67■□□□□ 0.26
SREBF1-221ENST00000583080 ILKQ13418 452 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 PROX2Q3B8N5 592 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 POM121L1PQ3SYA9 428 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 ERICH1Q86X53 443 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 OXR1Q8N573 874 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 MFSD2AQ8NA29 543 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 FRS2Q8WU20 508 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 RFFLQ8WZ73 363 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 BAP1Q92560 729 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 ST7Q9NRC1 585 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 CLCA2Q9UQC9 943 aa16.67■□□□□ 0.26
SREBF1-221ENST00000583080 PLRG1O43660 514 aaKnown RBP16.66■□□□□ 0.26
SREBF1-221ENST00000583080 APOEP02649 317 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 PLA2G2AP14555 144 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 RPL34P49207 117 aaKnown RBP16.66■□□□□ 0.26
SREBF1-221ENST00000583080 TLE3Q04726 772 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 CCDC173Q0VFZ6 552 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 CNTN1Q12860 1018 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 STILQ15468 1287 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 AGBL4Q5VU57 503 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 PCSK4Q6UW60 755 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 RRAGAQ7L523 313 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 PRPF39Q86UA1 669 aaKnown RBP16.66■□□□□ 0.26
SREBF1-221ENST00000583080 ARHGEF19Q8IW93 802 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 DCBLD1Q8N8Z6 715 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 LMO3Q8TAP4 145 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 ERCC4Q92889 916 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-221ENST00000583080 FGF11Q92914 225 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 SPAG5Q96R06 1193 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 TJP2Q9UDY2 1190 aa16.66■□□□□ 0.26
SREBF1-221ENST00000583080 TPX2Q9ULW0 747 aaKnown RBP16.66■□□□□ 0.26
SREBF1-221ENST00000583080 SIGLEC6O43699 453 aa16.65■□□□□ 0.26
SREBF1-221ENST00000583080 IGLV3-25P01717 112 aa16.65■□□□□ 0.26
SREBF1-221ENST00000583080 ACP1P24666 158 aa16.65■□□□□ 0.26
SREBF1-221ENST00000583080 GPD2P43304 727 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms