RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 MAP7D1Q3KQU3 841 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 EFHC2Q5JST6 749 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 RWDD4Q6NW29 188 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 SLFN11Q7Z7L1 901 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 TMPRSS6Q8IU80 811 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 FRMD1Q8N878 549 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 OR8K1Q8NGG5 319 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 OR52K2Q8NGK3 314 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 PRCCQ92733 491 aaPredicted RBP12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 NTAN1Q96AB6 310 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 SIPA1Q96FS4 1042 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 ZC3H10Q96K80 434 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 RPL10LQ96L21 214 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 ZYG11BQ9C0D3 744 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 MKRN2Q9H000 416 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 ISCUQ9H1K1 167 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 DUSP15Q9H1R2 295 aaPredicted RBP12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 MRPL47Q9HD33 250 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 ARHGAP20Q9P2F6 1191 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 OR12D3Q9UGF7 316 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 SUN2Q9UH99 717 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 VPS28Q9UK41 221 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 CYP8B1Q9UNU6 501 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 RIF1Q5UIP0 2472 aaKnown RBP12.96□□□□□ -0.34
SMARCE1-218ENST00000582955 A0A087X0T9 212 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 MFAP3LO75121 409 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 FAM228BP0C875 321 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 ACADMP11310 421 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 EIF4A3P38919 411 aaKnown RBP12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 NNMTP40261 264 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 STK19P49842 368 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 PLK1P53350 603 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 COPAP53621 1224 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 SULT2A1Q06520 285 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 SPEM2Q0P670 501 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 CAMK2GQ13555 558 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 CCDC122Q5T0U0 273 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 C6orf118Q5T5N4 469 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 SARM1Q6SZW1 724 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 LPCAT2Q7L5N7 544 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 SETD3Q86TU7 594 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 KIAA2013Q8IYS2 634 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 OR2T3Q8NH03 318 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 TBC1D31Q96DN5 1066 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 MYO19Q96H55 970 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 LOXL4Q96JB6 756 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 MRGPRX3Q96LB0 322 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 FEM1AQ9BSK4 669 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 TRIM7Q9C029 511 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 RBSNQ9H1K0 784 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 OSBPL2Q9H1P3 480 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 ARRDC1-AS1Q9H2J1 176 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 DEF6Q9H4E7 631 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 MTG2Q9H4K7 406 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 CD93Q9NPY3 652 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 MBD1Q9UIS9 605 aaPredicted RBP12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 SLC25A13Q9UJS0 675 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 USP18Q9UMW8 372 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 TBC1D30Q9Y2I9 924 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 FAM186AA6NE01 2351 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 OTOGLQ3ZCN5 2332 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 CKAP5Q14008 2032 aa12.95□□□□□ -0.34
SMARCE1-218ENST00000582955 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 IGHV1OR15-9A0A0B4J2B8 117 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 TMEM191CA6NGB0 347 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 TTC34A8MYJ7 566 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 FAM72CH0Y354 149 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 AP5Z1O43299 807 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 RNF8O76064 485 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 EPN2O95208 641 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 HNRNPH3P31942 346 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 DHPSP49366 369 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 ADKP55263 362 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 KRT83P78385 493 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 NRG1Q02297 640 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 RPL6Q02878 288 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 CREB5Q02930 508 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 SCAPQ12770 1279 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 HNRNPA1L2Q32P51 320 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 FAM72AQ5TYM5 149 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 PMS2CLQ68D20 193 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 FAM72DQ6L9T8 149 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 ALKBH5Q6P6C2 394 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 SLC36A4Q6YBV0 504 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 ARMCX6Q7L4S7 300 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 FAM72BQ86X60 149 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 DRC7Q8IY82 874 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 TMEFF1Q8IYR6 380 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 KDM1BQ8NB78 822 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 ALG14Q96F25 216 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 DNAJC7Q99615 494 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 MAGEB5Q9BZ81 275 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 THAP2Q9H0W7 228 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 FBRSQ9HAH7 460 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 PRSS16Q9NQE7 514 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 ABHD10Q9NUJ1 306 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 PPARGC1AQ9UBK2 798 aaKnown RBP12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 SLCO3A1Q9UIG8 710 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 OR51B4Q9Y5P0 310 aa12.94□□□□□ -0.34
SMARCE1-218ENST00000582955 SPAG17Q6Q759 2223 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms