RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 SIPA1Q96FS4 1042 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 FEM1AQ9BSK4 669 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 TMPRSS4Q9NRS4 437 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 PPARGC1AQ9UBK2 798 aaKnown RBP14.38□□□□□ -0.11
GGA3-215ENST00000582821 OR51B4Q9Y5P0 310 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 TNRC6BQ9UPQ9 1833 aaKnown RBP14.38□□□□□ -0.11
GGA3-215ENST00000582821 CHD5Q8TDI0 1954 aa14.38□□□□□ -0.11
GGA3-215ENST00000582821 CACNA1EQ15878 2313 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 TARSL2A2RTX5 802 aaKnown RBP14.37□□□□□ -0.11
GGA3-215ENST00000582821 E9PAM4 449 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 AP5Z1O43299 807 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 RTN2O75298 545 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 CNTN5O94779 1100 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 FTLP02792 175 aaPredicted RBP14.37□□□□□ -0.11
GGA3-215ENST00000582821 SKILP12757 684 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 RRM1P23921 792 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 GGCXP38435 758 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 MPLP40238 635 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 DPP6P42658 865 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 HDAC4P56524 1084 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 RPL7AP62424 266 aaKnown RBP14.37□□□□□ -0.11
GGA3-215ENST00000582821 ZBTB16Q05516 673 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 CDO1Q16878 200 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 RAB6CQ53S08 254 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 ALFQ53S48 1182 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 KIAA1324Q6UXG2 1013 aaKnown RBP14.37□□□□□ -0.11
GGA3-215ENST00000582821 FAM172AQ8WUF8 416 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 NTAN1Q96AB6 310 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 XPO4Q9C0E2 1151 aaKnown RBP14.37□□□□□ -0.11
GGA3-215ENST00000582821 RAB6CQ9H0N0 254 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 ISCUQ9H1K1 167 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 SLC6A17Q9H1V8 727 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 VPS45Q9NRW7 570 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 PARVAQ9NVD7 372 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 WSB2Q9NYS7 404 aaPredicted RBP14.37□□□□□ -0.11
GGA3-215ENST00000582821 ZNF212Q9UDV6 495 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 SLCO3A1Q9UIG8 710 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 USP18Q9UMW8 372 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 LUC7L2Q9Y383 392 aaKnown RBP14.37□□□□□ -0.11
GGA3-215ENST00000582821 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.37□□□□□ -0.111e-7■■□□□ 13.4
GGA3-215ENST00000582821 SNX10Q9Y5X0 201 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 KNL1Q8NG31 2342 aa14.37□□□□□ -0.11
GGA3-215ENST00000582821 CNOT1A5YKK6 2376 aaKnown RBP14.37□□□□□ -0.11
GGA3-215ENST00000582821 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 ANKRD62A6NC57 917 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 CBFA2T2O43439 604 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 CD6P30203 668 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 OXTRP30559 389 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 NNMTP40261 264 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 CTSOP43234 321 aaPredicted RBP14.36□□□□□ -0.11
GGA3-215ENST00000582821 DHPSP49366 369 aaPredicted RBP14.36□□□□□ -0.11
GGA3-215ENST00000582821 TPMTP51580 245 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 CREB5Q02930 508 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 SCAPQ12770 1279 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 MAMLD1Q13495 774 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 MANEALQ5VSG8 457 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 DCUN1D2Q6PH85 259 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 ZNF783Q6ZMS7 281 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 PRR23CQ6ZRP0 262 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 DRC7Q8IY82 874 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 TMEFF1Q8IYR6 380 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 OR52K2Q8NGK3 314 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 ERLEC1Q96DZ1 483 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 ZNF419Q96HQ0 510 aaPredicted RBP14.36□□□□□ -0.11
GGA3-215ENST00000582821 CNPY3Q9BT09 278 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 RSPH9Q9H1X1 276 aaPredicted RBP14.36□□□□□ -0.11
GGA3-215ENST00000582821 MPP6Q9NZW5 540 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 OR12D3Q9UGF7 316 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 CYP8B1Q9UNU6 501 aa14.36□□□□□ -0.11
GGA3-215ENST00000582821 ILVBLA1L0T0 632 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 TMCO5BA8MYB1 307 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 CCP110O43303 1012 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 ATP9BO43861 1147 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 SRGAP2O75044 1071 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 GYPCP04921 128 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 SERPING1P05155 500 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 ACADMP11310 421 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 SDHBP21912 280 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 HNRNPH3P31942 346 aaKnown RBP14.35□□□□□ -0.11
GGA3-215ENST00000582821 AIF1P55008 147 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 RPS14P62263 151 aaKnown RBP14.35□□□□□ -0.11
GGA3-215ENST00000582821 RPL6Q02878 288 aaKnown RBP14.35□□□□□ -0.11
GGA3-215ENST00000582821 C6orf118Q5T5N4 469 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 C9orf64Q5T6V5 341 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 RNF219Q5W0B1 726 aaPredicted RBP14.35□□□□□ -0.11
GGA3-215ENST00000582821 ZNF366Q8N895 744 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 FNIP1Q8TF40 1166 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 CPLX3Q8WVH0 158 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 PTPRN2Q92932 1015 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 MCEEQ96PE7 176 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 ZYG11BQ9C0D3 744 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 SCML1Q9UN30 329 aa14.35□□□□□ -0.11
GGA3-215ENST00000582821 EDDM13A0A1B0GTR0 161 aa14.34□□□□□ -0.11
GGA3-215ENST00000582821 CXorf51AA0A1B0GTR3 108 aa14.34□□□□□ -0.11
GGA3-215ENST00000582821 TMEM191CA6NGB0 347 aa14.34□□□□□ -0.11
GGA3-215ENST00000582821 TTC34A8MYJ7 566 aa14.34□□□□□ -0.11
GGA3-215ENST00000582821 SIN3BO75182 1162 aa14.34□□□□□ -0.11
GGA3-215ENST00000582821 NDUFS2O75306 463 aa14.34□□□□□ -0.11
GGA3-215ENST00000582821 RHOCP08134 193 aa14.34□□□□□ -0.11
GGA3-215ENST00000582821 PLEKP08567 350 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms