RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ILKQ13418 452 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 NNTQ13423 1086 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 STIM1Q13586 685 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 CAMK4Q16566 473 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 DCAF6Q58WW2 860 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 SLC45A4Q5BKX6 768 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 MS4A13Q5J8X5 152 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 SFMBT2Q5VUG0 894 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 TMEM270Q6UE05 265 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 OXR1Q8N573 874 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 OR14C36Q8NHC7 312 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 DQX1Q8TE96 717 aaKnown RBP14.03□□□□□ -0.16
SS18-222ENST00000582792 SLC39A7Q92504 469 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 SLC39A13Q96H72 371 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 SERAC1Q96JX3 654 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 HSFY1Q96LI6 401 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 SERPINB11Q96P15 392 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 NUCKS1Q9H1E3 243 aaKnown RBP14.03□□□□□ -0.16
SS18-222ENST00000582792 TLR6Q9Y2C9 796 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 PTPRQQ9UMZ3 2332 aa14.03□□□□□ -0.16
SS18-222ENST00000582792 MYLKQ15746 1914 aa14.02□□□□□ -0.16
SS18-222ENST00000582792 M0QYV0 167 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 ATXN7O15265 892 aaPredicted RBP14.02□□□□□ -0.17
SS18-222ENST00000582792 C1QL1O75973 258 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 ZIC2O95409 532 aaPredicted RBP14.02□□□□□ -0.17
SS18-222ENST00000582792 BNIP3Q12983 259 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 STILQ15468 1287 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 CNGA2Q16280 664 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 CCDC183Q5T5S1 534 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 CFAP52Q8N1V2 620 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 STK40Q8N2I9 435 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 SNIP1Q8TAD8 396 aaKnown RBP14.02□□□□□ -0.17
SS18-222ENST00000582792 BAP1Q92560 729 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 ERCC4Q92889 916 aaPredicted RBP14.02□□□□□ -0.17
SS18-222ENST00000582792 PTPRN2Q92932 1015 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 DHTKD1Q96HY7 919 aaPredicted RBP14.02□□□□□ -0.17
SS18-222ENST00000582792 ZSWIM1Q9BR11 485 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 SLCO3A1Q9UIG8 710 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 CEP83Q9Y592 693 aa14.02□□□□□ -0.17
SS18-222ENST00000582792 TBC1D3DA0A087WVF3 549 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 TBC1D3IA0A087WXS9 549 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 TBC1D3EA0A087X179 549 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 TBC1D3KA0A087X1G2 549 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 TBC1D3FA6NER0 549 aaPredicted RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 TBC1D3LB9A6J9 549 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 IL1BP01584 269 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 TBC1D3HP0C7X1 549 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 CKMT2P17540 419 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 MZF1P28698 734 aaPredicted RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 DRD3P35462 400 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 PRCPP42785 496 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 PPP2CBP62714 309 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 PPP2CAP67775 309 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 FKBP3Q00688 224 aaKnown RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 ELAVL3Q14576 367 aaKnown RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 KLHL40Q2TBA0 621 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 SKOR2Q2VWA4 1001 aaPredicted RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 CT47A1Q5JQC4 288 aaPredicted RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 RNF219Q5W0B1 726 aaPredicted RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 TBC1D3GQ6DHY5 549 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 TBC1D3CQ6IPX1 549 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 NAPEPLDQ6IQ20 393 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 KANSL1Q7Z3B3 1105 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 SPATS2Q86XZ4 545 aaKnown RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 TBC1D3Q8IZP1 549 aaPredicted RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 APCDD1Q8J025 514 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 CACTIN-AS1Q8N1I8 211 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 MFSD2AQ8NA29 543 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 LSM14AQ8ND56 463 aaKnown RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 SLC35C1Q96A29 364 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 FAM131CQ96AQ9 280 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 RPL10LQ96L21 214 aaKnown RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 FCRL3Q96P31 734 aaPredicted RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 TSG101Q99816 390 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 MIS12Q9H081 205 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 ARMCX3Q9UH62 379 aaPredicted RBP14.01□□□□□ -0.17
SS18-222ENST00000582792 NAALADL1Q9UQQ1 740 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 RAI2Q9Y5P3 530 aa14.01□□□□□ -0.17
SS18-222ENST00000582792 RNF225M0QZC1 329 aaPredicted RBP14□□□□□ -0.17
SS18-222ENST00000582792 PSMA7O14818 248 aa14□□□□□ -0.17
SS18-222ENST00000582792 MOCS2O96007 188 aaPredicted RBP14□□□□□ -0.17
SS18-222ENST00000582792 BMP6P22004 513 aa14□□□□□ -0.17
SS18-222ENST00000582792 BRD2P25440 801 aaKnown RBP14□□□□□ -0.17
SS18-222ENST00000582792 NNMTP40261 264 aa14□□□□□ -0.17
SS18-222ENST00000582792 STK19P49842 368 aaPredicted RBP14□□□□□ -0.17
SS18-222ENST00000582792 ANKRD40Q6AI12 368 aa14□□□□□ -0.17
SS18-222ENST00000582792 PRPF39Q86UA1 669 aaKnown RBP14□□□□□ -0.17
SS18-222ENST00000582792 TAC4Q86UU9 113 aa14□□□□□ -0.17
SS18-222ENST00000582792 IQCHQ86VS3 1027 aa14□□□□□ -0.17
SS18-222ENST00000582792 LGI2Q8N0V4 545 aa14□□□□□ -0.17
SS18-222ENST00000582792 MLKLQ8NB16 471 aa14□□□□□ -0.17
SS18-222ENST00000582792 RFFLQ8WZ73 363 aa14□□□□□ -0.17
SS18-222ENST00000582792 KDM4CQ9H3R0 1056 aa14□□□□□ -0.17
SS18-222ENST00000582792 ARHGAP20Q9P2F6 1191 aa14□□□□□ -0.17
SS18-222ENST00000582792 XPO7Q9UIA9 1087 aaKnown RBP14□□□□□ -0.17
SS18-222ENST00000582792 DMTF1Q9Y222 760 aa14□□□□□ -0.17
SS18-222ENST00000582792 PCDHB4Q9Y5E5 795 aa14□□□□□ -0.17
SS18-222ENST00000582792 ARID1BQ8NFD5 2236 aaPredicted RBP14□□□□□ -0.17
SS18-222ENST00000582792 ZNF462Q96JM2 2506 aa14□□□□□ -0.17
SS18-222ENST00000582792 PPP1R3GB7ZBB8 358 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms