RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ALKQ9UM73 1620 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 FAM90A18PA6NE21 464 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 FAM90A16PA6NEW6 464 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 FAM90A9PA6NNJ1 464 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 FAM90A5PA8MXJ8 464 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 MYO1GB0I1T2 1018 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 TMEM232C9JQI7 657 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 TAF4O00268 1085 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 TNPO2O14787 897 aaKnown RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 PCDH17O14917 1159 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 WDR46O15213 610 aaKnown RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 TP73O15350 636 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 PPP6R2O75170 966 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 TBX10O75333 385 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 GJB3O75712 270 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 GJB1P08034 283 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 SPARCP09486 303 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 FAM90A15PP0C7V4 464 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 FAM90A14PP0C7W9 464 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 EGR2P11161 476 aaPredicted RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 CYP2C9P11712 490 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 IFNAR1P17181 557 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 SAT1P21673 171 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 SP100P23497 879 aaPredicted RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 YY1P25490 414 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 KLRK1P26718 216 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 EPHA8P29322 1005 aaPredicted RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 TM4SF1P30408 202 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 GCH1P30793 250 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 GUCY1A2P33402 732 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 KRT2P35908 639 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 THPOP40225 353 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 HADHAP40939 763 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 CTCFP49711 727 aaPredicted RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 ZNF41P51814 821 aaPredicted RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 NPEPPSP55786 919 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 WNT3P56703 355 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 EVCP57679 992 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 PSMC1P62191 440 aaKnown RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 AP1B1Q10567 949 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 AIMP2Q13155 320 aaKnown RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 CRYMQ14894 314 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 KRTCAP3Q53RY4 240 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 GARNL3Q5VVW2 1013 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 LIPMQ5VYY2 423 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 ALKBH5Q6P6C2 394 aaKnown RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 ABRAXAS1Q6UWZ7 409 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 FAM83HQ6ZRV2 1179 aaPredicted RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 TECPR1Q7Z6L1 1165 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 GALNT7Q86SF2 657 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 USP37Q86T82 979 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 PDSS2Q86YH6 399 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 CCDC170Q8IYT3 715 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 UNC5BQ8IZJ1 945 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 NAT8LQ8N9F0 302 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 SPC24Q8NBT2 197 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 CPEB3Q8NE35 698 aaKnown RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 IL17RDQ8NFM7 739 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 OR5AN1Q8NGI8 311 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 DEPDC1BQ8WUY9 529 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 TAF4BQ92750 862 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 CENPTQ96BT3 561 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 WDR92Q96MX6 357 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 MOGAT1Q96PD6 335 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 RAB3IPQ96QF0 476 aaPredicted RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 FNBP1Q96RU3 617 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 ANP32EQ9BTT0 268 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 PI4K2AQ9BTU6 479 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 TEX12Q9BXU0 123 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 DNAI2Q9GZS0 605 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 USP44Q9H0E7 712 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 UNKLQ9H9P5 680 aaKnown RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 COPS7BQ9H9Q2 264 aaPredicted RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 ADPRHL2Q9NX46 363 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 TAB2Q9NYJ8 693 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 MOCS1Q9NZB8 636 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 MRPL15Q9P015 296 aaKnown RBP3.34□□□□□ -1.87
KPNB1-208ENST00000580019 DKK4Q9UBT3 224 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 KCND3Q9UK17 655 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 CCL27Q9Y4X3 112 aa3.34□□□□□ -1.87
KPNB1-208ENST00000580019 WRNQ14191 1432 aaPredicted RBP eCLIP3.34□□□□□ -1.88
KPNB1-208ENST00000580019 ARHGEF12Q9NZN5 1544 aa3.34□□□□□ -1.88
KPNB1-208ENST00000580019 OR2W5A6NFC9 320 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 PRSS29PA6NIE9 313 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 UNC119BA6NIH7 251 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 A8MXE2 369 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 J3KTA2 159 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 GRM6O15303 877 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 INSIG1O15503 277 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 LARGE1O95461 756 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 METTL18O95568 372 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 JUNP05412 331 aaKnown RBP3.33□□□□□ -1.88
KPNB1-208ENST00000580019 GAAP10253 952 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 P4HA1P13674 534 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 TNNT1P13805 278 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 MST1P26927 711 aa3.33□□□□□ -1.88
KPNB1-208ENST00000580019 APOBEC3AP31941 199 aaPredicted RBP3.33□□□□□ -1.88
KPNB1-208ENST00000580019 PTPN7P35236 360 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms