RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 DENND1CQ8IV53 801 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 KCTD6Q8NC69 237 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 OSCP1Q8WVF1 389 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TUBB2BQ9BVA1 445 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MAGEB5Q9BZ81 275 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SMG9Q9H0W8 520 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ZWILCHQ9H900 591 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PCDH18Q9HCL0 1135 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TRPV5Q9NQA5 729 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TMPRSS4Q9NRS4 437 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SMPD4Q9NXE4 827 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 DONSONQ9NYP3 566 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CWC15Q9P013 229 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MARK1Q9P0L2 795 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 COX16Q9P0S2 106 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RNF14Q9UBS8 474 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ZNF212Q9UDV6 495 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 XPO7Q9UIA9 1087 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RAB23Q9ULC3 237 aa11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PACSIN2Q9UNF0 486 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ENC1O14682 589 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CHADO15335 359 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 LRIG2O94898 1065 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 KCNK5O95279 499 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 HMBSP08397 361 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TNNT1P13805 278 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PSMC3P17980 439 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TACR2P21452 398 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 KCNA4P22459 653 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SLC6A4P31645 630 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 GBP2P32456 591 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 VIPR2P41587 438 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MARCKSL1P49006 195 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 HTR4Q13639 388 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SMTNL2Q2TAL5 461 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TFDP3Q5H9I0 405 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SLC9A4Q6AI14 798 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FBXL22Q6P050 247 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PARM1Q6UWI2 310 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 VITQ6UXI7 678 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 LRRC31Q6UY01 552 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SYT10Q6XYQ8 523 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 NLRP14Q86W24 1093 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 BBS7Q8IWZ6 715 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PYROXD2Q8N2H3 581 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ACTRT1Q8TDG2 376 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FGF14Q92915 247 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CSPG4P5Q96PW8 444 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RNF157Q96PX1 679 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 KCTD15Q96SI1 283 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 OSBPL9Q96SU4 736 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 EPAS1Q99814 870 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 DHX35Q9H5Z1 703 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 THG1LQ9NWX6 298 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 DNAI1Q9UI46 699 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FBXO10Q9UK96 956 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SAR1BQ9Y6B6 198 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RALGAPA1Q6GYQ0 2036 aa11.47□□□□□ -0.57
CDK5RAP3-204ENST00000577664 KIF26AQ9ULI4 1882 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 hCG_1818297A0A087WSY0 165 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CXorf51AA0A1B0GTR3 108 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 E9PAM4 449 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ARNTLO00327 626 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 FGF10O15520 208 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PENKP01210 267 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CD48P09326 243 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TDGF1P13385 188 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RHOQP17081 205 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CASQ1P31415 396 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ARL4AP40617 200 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CETN2P41208 172 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SSR1P43307 286 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CDH6P55285 790 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 KLF1Q13351 362 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PDGFRLQ15198 375 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 EML3Q32P44 896 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MPPE1Q53F39 396 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ANKRD20A8PQ5CZ79 823 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 MFSD7Q6UXD7 560 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 SPOCD1Q6ZMY3 1216 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 RFX8Q6ZV50 586 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CHST9Q7L1S5 443 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ANKS1BQ7Z6G8 1248 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 C14orf80Q86SX3 495 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 LZTR1Q8N653 840 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PCDH19Q8TAB3 1148 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 HSPH1Q92598 858 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 IRF7Q92985 503 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 IGSF8Q969P0 613 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CLDN23Q96B33 292 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 C16orf45Q96MC5 204 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 PLA2G2FQ9BZM2 168 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ZYG11BQ9C0D3 744 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 LINC00597Q9H2U6 94 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TMEM248Q9NWD8 314 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 CACNA2D2Q9NY47 1150 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 TBC1D30Q9Y2I9 924 aa11.46□□□□□ -0.57
CDK5RAP3-204ENST00000577664 ADAMTS20P59510 1910 aa11.46□□□□□ -0.58
CDK5RAP3-204ENST00000577664 AKAP13Q12802 2813 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms