RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 CALB1P05937 261 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 HOXB2P14652 356 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 MMP8P22894 467 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 HOXD9P28356 352 aaPredicted RBP7.29□□□□□ -1.24
CASC3-205ENST00000577605 NSFP46459 744 aaKnown RBP7.29□□□□□ -1.24
CASC3-205ENST00000577605 GSCP56915 257 aaPredicted RBP7.29□□□□□ -1.24
CASC3-205ENST00000577605 NOMO3P69849 1222 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 APBA1Q02410 837 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 LMNB2Q03252 620 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 ZBTB16Q05516 673 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 SULT2A1Q06520 285 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 TLR1Q15399 786 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 PTPN20Q4JDL3 420 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 FIGNQ5HY92 759 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 MS4A13Q5J8X5 152 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 SYPL2Q5VXT5 272 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 HEATR6Q6AI08 1181 aaKnown RBP7.29□□□□□ -1.24
CASC3-205ENST00000577605 TMEM214Q6NUQ4 689 aaKnown RBP7.29□□□□□ -1.24
CASC3-205ENST00000577605 PKN3Q6P5Z2 889 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 LRRC31Q6UY01 552 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 RABEPKQ7Z6M1 372 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 TAC4Q86UU9 113 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 DHX40Q8IX18 779 aaKnown RBP7.29□□□□□ -1.24
CASC3-205ENST00000577605 CCDC33Q8N5R6 958 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 OLIG1Q8TAK6 271 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 NT5C3BQ969T7 300 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 VCPIP1Q96JH7 1222 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 FUCA2Q9BTY2 467 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 WDCPQ9H6R7 721 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 FAM204AQ9H8W3 233 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 PRDM16Q9HAZ2 1276 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 ACP6Q9NPH0 428 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 NLRC4Q9NPP4 1024 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 DDIT4Q9NX09 232 aa7.29□□□□□ -1.24
CASC3-205ENST00000577605 BCCIPQ9P287 314 aaKnown RBP eCLIP7.29□□□□□ -1.24
CASC3-205ENST00000577605 NOCTQ9UK39 431 aaKnown RBP7.29□□□□□ -1.24
CASC3-205ENST00000577605 AJAP1Q9UKB5 411 aaPredicted RBP7.29□□□□□ -1.24
CASC3-205ENST00000577605 BZW2Q9Y6E2 419 aaKnown RBP7.29□□□□□ -1.24
CASC3-205ENST00000577605 KIF26AQ9ULI4 1882 aaPredicted RBP7.29□□□□□ -1.24
CASC3-205ENST00000577605 A0A1B0GTH6 734 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 CXorf51AA0A1B0GTR3 108 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 PRRT4C9JH25 899 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 M0QYT0 321 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 SGK1O00141 431 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 MSI1O43347 362 aaKnown RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 TBL1XO60907 577 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 GFPT2O94808 682 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 EPN2O95208 641 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 CALCAP01258 141 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 SRPRAP08240 638 aaKnown RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 MMEP08473 750 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 DLDP09622 509 aaKnown RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 PABPC1P11940 636 aaKnown RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 POLR2EP19388 210 aaKnown RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 TACR2P21452 398 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 OXTRP30559 389 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 HOXD12P35452 270 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 NNMTP40261 264 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 P2RY2P41231 377 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 CXCR3P49682 368 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 ST13P50502 369 aaKnown RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 PLK1P53350 603 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 ST8SIA6P61647 398 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 DEUP1Q05D60 604 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 IQCB1Q15051 598 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 CSRP2Q16527 193 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 DBN1Q16643 649 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 ARL13BQ3SXY8 428 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 FAM133BQ5BKY9 247 aaKnown RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 ZC3H12AQ5D1E8 599 aaKnown RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 FAM102AQ5T9C2 384 aaPredicted RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 EMC10Q5UCC4 262 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 NAIF1Q69YI7 327 aaPredicted RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 ANO7Q6IWH7 933 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 PRR23BQ6ZRT6 265 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 FAM183BPQ6ZVS7 135 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 LPCAT2Q7L5N7 544 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 APTXQ7Z2E3 356 aaKnown RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 XYLT1Q86Y38 959 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 PHF13Q86YI8 300 aaPredicted RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 PASD1Q8IV76 773 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 MFN1Q8IWA4 741 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 PGBD3Q8N328 593 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 SYN2Q92777 582 aaPredicted RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 TTC17Q96AE7 1141 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 HHIPQ96QV1 700 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 HAPLN3Q96S86 360 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 SRPK1Q96SB4 655 aaKnown RBP7.28□□□□□ -1.24
CASC3-205ENST00000577605 NPY6RQ99463 290 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 AGPAT1Q99943 283 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 NCAPGQ9BPX3 1015 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 CIPCQ9C0C6 399 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 PCED1AQ9H1Q7 454 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 HSD3B7Q9H2F3 369 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 GPAMQ9HCL2 828 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 VPS45Q9NRW7 570 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 PLK2Q9NYY3 685 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 AIPL1Q9NZN9 384 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 GGA2Q9UJY4 613 aa7.28□□□□□ -1.24
CASC3-205ENST00000577605 SCML1Q9UN30 329 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms