RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 POMZP3Q6PJE2 187 aa9□□□□□ -0.97
CDH8-203ENST00000577390 CASP12Q6UXS9 341 aa9□□□□□ -0.97
CDH8-203ENST00000577390 P2RX5Q93086 422 aa9□□□□□ -0.97
CDH8-203ENST00000577390 ZNF333Q96JL9 665 aa9□□□□□ -0.97
CDH8-203ENST00000577390 HNRNPABQ99729 332 aaKnown RBP9□□□□□ -0.97
CDH8-203ENST00000577390 MRM3Q9HC36 420 aaKnown RBP9□□□□□ -0.97
CDH8-203ENST00000577390 SMURF1Q9HCE7 757 aa9□□□□□ -0.97
CDH8-203ENST00000577390 TMEM39AQ9NV64 488 aa9□□□□□ -0.97
CDH8-203ENST00000577390 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9□□□□□ -0.97
CDH8-203ENST00000577390 A0A1W2PQJ5 194 aa9□□□□□ -0.97
CDH8-203ENST00000577390 PIP5K1CO60331 668 aa9□□□□□ -0.97
CDH8-203ENST00000577390 FARP2O94887 1054 aaPredicted RBP9□□□□□ -0.97
CDH8-203ENST00000577390 CELF2O95319 508 aaKnown RBP9□□□□□ -0.97
CDH8-203ENST00000577390 LONRF1Q17RB8 773 aa9□□□□□ -0.97
CDH8-203ENST00000577390 TTC7BQ86TV6 843 aa9□□□□□ -0.97
CDH8-203ENST00000577390 ENDOVQ8N8Q3 282 aaKnown RBP9□□□□□ -0.97
CDH8-203ENST00000577390 ACE2Q9BYF1 805 aaPredicted RBP9□□□□□ -0.97
CDH8-203ENST00000577390 TP53BP1Q12888 1972 aaPredicted RBP9□□□□□ -0.97
CDH8-203ENST00000577390 KNDC1Q76NI1 1749 aa9□□□□□ -0.97
CDH8-203ENST00000577390 KRT36O76013 467 aa9□□□□□ -0.97
CDH8-203ENST00000577390 CPA2P48052 419 aa9□□□□□ -0.97
CDH8-203ENST00000577390 BNIP2Q12982 314 aa9□□□□□ -0.97
CDH8-203ENST00000577390 RUNX2Q13950 521 aa9□□□□□ -0.97
CDH8-203ENST00000577390 ZC2HC1CQ53FD0 456 aaPredicted RBP9□□□□□ -0.97
CDH8-203ENST00000577390 KLHDC10Q6PID8 442 aa9□□□□□ -0.97
CDH8-203ENST00000577390 EXOC3L1Q86VI1 746 aa9□□□□□ -0.97
CDH8-203ENST00000577390 HCN3Q9P1Z3 774 aa9□□□□□ -0.97
CDH8-203ENST00000577390 NUP50Q9UKX7 468 aa9□□□□□ -0.97
CDH8-203ENST00000577390 TRPM2O94759 1503 aa9□□□□□ -0.97
CDH8-203ENST00000577390 SEMA3DO95025 777 aa9□□□□□ -0.97
CDH8-203ENST00000577390 NUDT17P0C025 328 aa9□□□□□ -0.97
CDH8-203ENST00000577390 TPBGLP0DKB5 382 aa9□□□□□ -0.97
CDH8-203ENST00000577390 NAB2Q15742 525 aa9□□□□□ -0.97
CDH8-203ENST00000577390 NEK5Q6P3R8 708 aa9□□□□□ -0.97
CDH8-203ENST00000577390 HIST1H2AAQ96QV6 131 aa9□□□□□ -0.97
CDH8-203ENST00000577390 PARK7Q99497 189 aaKnown RBP9□□□□□ -0.97
CDH8-203ENST00000577390 RMND5AQ9H871 391 aa9□□□□□ -0.97
CDH8-203ENST00000577390 LMTK2Q8IWU2 1503 aa9□□□□□ -0.97
CDH8-203ENST00000577390 CDC42BPGQ6DT37 1551 aa9□□□□□ -0.97
CDH8-203ENST00000577390 MAGEB16A2A368 324 aa9□□□□□ -0.97
CDH8-203ENST00000577390 CBX6O95503 412 aa9□□□□□ -0.97
CDH8-203ENST00000577390 RLN1P04808 185 aa9□□□□□ -0.97
CDH8-203ENST00000577390 GSTT2P0CG29 244 aa9□□□□□ -0.97
CDH8-203ENST00000577390 GSTT2BP0CG30 244 aa9□□□□□ -0.97
CDH8-203ENST00000577390 ZAP70P43403 619 aa9□□□□□ -0.97
CDH8-203ENST00000577390 QPCTQ16769 361 aa9□□□□□ -0.97
CDH8-203ENST00000577390 ZNF563Q8TA94 476 aa9□□□□□ -0.97
CDH8-203ENST00000577390 PHTF1Q9UMS5 762 aa9□□□□□ -0.97
CDH8-203ENST00000577390 ZNF318Q5VUA4 2279 aa9□□□□□ -0.97
CDH8-203ENST00000577390 SH3PXD2BA1X283 911 aa9□□□□□ -0.97
CDH8-203ENST00000577390 H7C4K7 107 aa9□□□□□ -0.97
CDH8-203ENST00000577390 ITPKBP27987 946 aa9□□□□□ -0.97
CDH8-203ENST00000577390 CPT1AP50416 773 aa9□□□□□ -0.97
CDH8-203ENST00000577390 EIF3EP60228 445 aaKnown RBP9□□□□□ -0.97
CDH8-203ENST00000577390 SCGB2A2Q13296 93 aa9□□□□□ -0.97
CDH8-203ENST00000577390 SLC29A2Q14542 456 aa9□□□□□ -0.97
CDH8-203ENST00000577390 CTC1Q2NKJ3 1217 aa9□□□□□ -0.97
CDH8-203ENST00000577390 NECAB2Q7Z6G3 386 aa9□□□□□ -0.97
CDH8-203ENST00000577390 LNX2Q8N448 690 aa9□□□□□ -0.97
CDH8-203ENST00000577390 ELP3Q9H9T3 547 aa9□□□□□ -0.97
CDH8-203ENST00000577390 FANCFQ9NPI8 374 aa9□□□□□ -0.97
CDH8-203ENST00000577390 AHSPQ9NZD4 102 aa9□□□□□ -0.97
CDH8-203ENST00000577390 TAGLN3Q9UI15 199 aa9□□□□□ -0.97
CDH8-203ENST00000577390 BTBD19C9JJ37 291 aa9□□□□□ -0.97
CDH8-203ENST00000577390 AIM2O14862 343 aa9□□□□□ -0.97
CDH8-203ENST00000577390 PRPF3O43395 683 aaKnown RBP9□□□□□ -0.97
CDH8-203ENST00000577390 PHC1P78364 1004 aa9□□□□□ -0.97
CDH8-203ENST00000577390 FGD3Q5JSP0 725 aa9□□□□□ -0.97
CDH8-203ENST00000577390 C6orf89Q6UWU4 347 aa9□□□□□ -0.97
CDH8-203ENST00000577390 HCAR2Q8TDS4 363 aa9□□□□□ -0.97
CDH8-203ENST00000577390 PIF1Q9H611 641 aa9□□□□□ -0.97
CDH8-203ENST00000577390 ERVK-11Q9UQG0 969 aa9□□□□□ -0.97
CDH8-203ENST00000577390 GPSM3Q9Y4H4 160 aa9□□□□□ -0.97
CDH8-203ENST00000577390 C1orf232A0A0U1RR37 186 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 MYMKA6NI61 221 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 USP1O94782 785 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 GNRH1P01148 92 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 RB1P06400 928 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 PTPN3P26045 913 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 HUNKP57058 714 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 ACSM2AQ08AH3 577 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 PSMD5Q16401 504 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 UAP1L1Q3KQV9 507 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 C16orf89Q6UX73 402 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 RDM1Q8NG50 284 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 S100ZQ8WXG8 99 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 C1QTNF1Q9BXJ1 281 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 SLC38A7Q9NVC3 462 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 RDH8Q9NYR8 311 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 ABCA8O94911 1581 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 TBXAS1P24557 533 aaPredicted RBP8.99□□□□□ -0.97
CDH8-203ENST00000577390 NFYCQ13952 458 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 ACAP1Q15027 740 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 TSNQ15631 228 aaKnown RBP8.99□□□□□ -0.97
CDH8-203ENST00000577390 SWI5Q1ZZU3 235 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 DCAF6Q58WW2 860 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 ZFP1Q6P2D0 407 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 ERP44Q9BS26 406 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 JMJD4Q9H9V9 463 aa8.99□□□□□ -0.97
CDH8-203ENST00000577390 CYP3A43Q9HB55 503 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms