RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	SEL1L2	Q5TEA6	688 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	RNF219	Q5W0B1	726 aa	Predicted RBP	10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	NCBP2-AS2	Q69YL0	99 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	SLC9A4	Q6AI14	798 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	GRAMD4	Q6IC98	578 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	C1orf228	Q6PIY5	440 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	TMCO3	Q6UWJ1	677 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	NPNT	Q6UXI9	565 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	TPRG1	Q6ZUI0	275 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	RALGPS2	Q86X27	583 aa	Predicted RBP	10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	TP53INP2	Q8IXH6	220 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	UBALD2	Q8IYN6	164 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	APCDD1	Q8J025	514 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	PHTF2	Q8N3S3	785 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	NPW	Q8N729	165 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	PLD5	Q8N7P1	536 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	OSBPL9	Q96SU4	736 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	PNKP	Q96T60	521 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	P2RY13	Q9BPV8	354 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	SLC2A11	Q9BYW1	496 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	OSBPL8	Q9BZF1	889 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	SLC39A8	Q9C0K1	460 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	NOL6	Q9H6R4	1146 aa	Known RBP	10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	C8orf33	Q9H7E9	229 aa	Predicted RBP	10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	ABCB8	Q9NUT2	735 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	KIAA1522	Q9P206	1035 aa	Predicted RBP	10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	DEC1	Q9P2X7	70 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	WNT16	Q9UBV4	365 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	GGA2	Q9UJY4	613 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	FBXL21	Q9UKT6	434 aa		10.21	□□□□□ -0.77
SPOP-222	ENST00000577134	COL6A3	P12111	3177 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	ILVBL	A1L0T0	632 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	ZNF185	O15231	689 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	MFSD11	O43934	449 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	CEP104	O60308	925 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	KAT7	O95251	611 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	MAP3K6	O95382	1288 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	PABPC1	P11940	636 aa	Known RBP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	GLUL	P15104	373 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	ZFX	P17010	805 aa	Predicted RBP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	CD72	P21854	359 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	PTPN7	P35236	360 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	ACVRL1	P37023	503 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	CETN2	P41208	172 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	EIF2D	P41214	584 aa	Known RBP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	ZXDA	P98168	799 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	GNA12	Q03113	381 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	SLC10A2	Q12908	348 aa	Predicted RBP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	TFDP2	Q14188	446 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	POLD3	Q15054	466 aa	Predicted RBP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	PAFAH1B3	Q15102	231 aa	Known RBP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	GEN1	Q17RS7	908 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	FUT11	Q495W5	492 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	PITRM1	Q5JRX3	1037 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	PAPD7	Q5XG87	772 aa	Known RBP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	AFMID	Q63HM1	303 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	SFTPA1	Q8IWL2	248 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	ARHGAP12	Q8IWW6	846 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	UMODL1-AS1	Q8N2C9	162 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	CCDC33	Q8N5R6	958 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	OR7D4	Q8NG98	312 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	COG1	Q8WTW3	980 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	FAM3C	Q92520	227 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	NUP205	Q92621	2012 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	ARHGEF2	Q92974	986 aa	Known RBP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	MS4A14	Q96JA4	679 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	PBK	Q96KB5	322 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	FEM1A	Q9BSK4	669 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	SPON2	Q9BUD6	331 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	MUC3B	Q9H195	1237 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	CARD9	Q9H257	536 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	LRRC19	Q9H756	370 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	ARHGEF3	Q9NR81	526 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	SAE1	Q9UBE0	346 aa	Predicted RBP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	INTS6	Q9UL03	887 aa	Known RBP	10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	SNX12	Q9UMY4	172 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	EFR3B	Q9Y2G0	817 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	SLC27A6	Q9Y2P4	619 aa		10.2	□□□□□ -0.78
SPOP-222	ENST00000577134	CHD5	Q8TDI0	1954 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	TCRBV7S2A1N4T	A0A589	114 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	KRBA1	A5PL33	1030 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	TBC1D3B	A6NDS4	549 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	ANTXRL	A6NF34	631 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	RASA4B	C9J798	803 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	PRRT4	C9JH25	899 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	DFFA	O00273	331 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	RASA4	O43374	803 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	RAMP2	O60895	175 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	TJP3	O95049	919 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	APOD	P05090	189 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	PECAM1	P16284	738 aa	Predicted RBP	10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	PRLR	P16471	622 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	GLDC	P23378	1020 aa		10.19	□□□□□ -0.78
SPOP-222	ENST00000577134	PAPOLA	P51003	745 aa	Known RBP	10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms