RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 E2F8A0AVK6 867 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 TPP1O14773 563 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 SETDB1Q15047 1291 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 PARP9Q8IXQ6 854 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 CERS2Q96G23 380 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 HHIPL1Q96JK4 782 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 TMEM237Q96Q45 408 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 PLXNA3P51805 1871 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 CCDC78A2IDD5 438 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 POLBP06746 335 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 TROVE2P10155 538 aaKnown RBP eCLIP24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 GATMP50440 423 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 NOGQ13253 232 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 ASRGL1Q7L266 308 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 CDKL2Q92772 493 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 AZIN2Q96A70 460 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 MFSD3Q96ES6 412 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 FCRL2Q96LA5 508 aaPredicted RBP24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 TEKT5Q96M29 485 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 SMOC2Q9H3U7 446 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 KCNK13Q9HB14 408 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 CASS4Q9NQ75 786 aa24.2■■□□□ 1.46
NPLOC4-217ENST00000574897 DOCK4Q8N1I0 1966 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 EOMESO95936 686 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 KRT16P08779 473 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 ABCG1P45844 678 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 USP46P62068 366 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 C14orf80Q86SX3 495 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 MTDHQ86UE4 582 aaKnown RBP24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 SPATA22Q8NHS9 363 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 RAET1EQ8TD07 263 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 ATXN7L3BQ96GX2 97 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 ZCWPW1Q9H0M4 648 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 MKS1Q9NXB0 559 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 ZFATQ9P243 1243 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 HAO1Q9UJM8 370 aa24.19■■□□□ 1.46
NPLOC4-217ENST00000574897 C2CD2LO14523 706 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 SOAT2O75908 522 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 UNC5CO95185 931 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 ALDH3A1P30838 453 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 BST1Q10588 318 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 CEP57Q86XR8 500 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 AGAP2Q99490 1192 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 MPP6Q9NZW5 540 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 DCTN3O75935 186 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 ITGA2BP08514 1039 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 CCNB1P14635 433 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 CRHR1P34998 444 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 PDE1CQ14123 709 aaPredicted RBP24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 CHI3L2Q15782 390 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 TAF1BQ53T94 588 aaPredicted RBP24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 PPM1JQ5JR12 505 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 LHX8Q68G74 356 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 ZNF449Q6P9G9 518 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 TIFABQ6ZNK6 161 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 ZCCHC23Q6ZST2 131 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 CCNJLQ8IV13 435 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 PRR11Q96HE9 360 aaPredicted RBP24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 NAT9Q9BTE0 207 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 TRIM55Q9BYV6 548 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 SLC39A8Q9C0K1 460 aa24.18■■□□□ 1.46
NPLOC4-217ENST00000574897 CFAP73A6NFT4 308 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 A8MUI8 341 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 MGRN1O60291 552 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 CBX6O95503 412 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 T-ENOLP0DO92 83 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 CCR1P32246 355 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 URGCPQ8TCY9 931 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 C20orf27Q9GZN8 174 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 BRD8Q9H0E9 1235 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 CD248Q9HCU0 757 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 STARD7Q9NQZ5 370 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 CHRAC1Q9NRG0 131 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 BFARQ9NZS9 450 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 TRHDEQ9UKU6 1024 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 EMCNQ9ULC0 261 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 ZCWPW2A0A1B0GU75 182 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 OAZ2O95190 189 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 FAM189BP81408 668 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 TMPRSS15P98073 1019 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 SPANXN3Q5MJ09 141 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 VARS2Q5ST30 1063 aaKnown RBP24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 MANEALQ5VSG8 457 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 BEND5Q7L4P6 421 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 ATAD1Q8NBU5 361 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 CAPNS2Q96L46 248 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 ZNF778Q96MU6 729 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 LRRC40Q9H9A6 602 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 ARHGEF3Q9NR81 526 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 STK38LQ9Y2H1 464 aa24.17■■□□□ 1.46
NPLOC4-217ENST00000574897 MTSS1O43312 755 aa24.16■■□□□ 1.46
NPLOC4-217ENST00000574897 MT-CYBP00156 380 aaPredicted RBP24.16■■□□□ 1.46
NPLOC4-217ENST00000574897 ZNF135P52742 658 aaPredicted RBP24.16■■□□□ 1.46
NPLOC4-217ENST00000574897 BRMS1LQ5PSV4 323 aa24.16■■□□□ 1.46
NPLOC4-217ENST00000574897 ITPRIPL1Q6GPH6 555 aa24.16■■□□□ 1.46
NPLOC4-217ENST00000574897 NUDCD3Q8IVD9 361 aa24.16■■□□□ 1.46
NPLOC4-217ENST00000574897 APBB2Q92870 758 aa24.16■■□□□ 1.46
NPLOC4-217ENST00000574897 E2F7Q96AV8 911 aa24.16■■□□□ 1.46
NPLOC4-217ENST00000574897 HAPLN3Q96S86 360 aa24.16■■□□□ 1.46
NPLOC4-217ENST00000574897 TMEM120AQ9BXJ8 343 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms