RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ELAVL3Q14576 367 aaKnown RBP17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CST6Q15828 149 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 RNF219Q5W0B1 726 aaPredicted RBP17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CACUL1Q86Y37 369 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ZNF683Q8IZ20 524 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 DEFB124Q8NES8 71 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 FRS2Q8WU20 508 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 PTPRN2Q92932 1015 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 RPRD1AQ96P16 312 aaPredicted RBP17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 FAM129BQ96TA1 746 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 FEM1AQ9BSK4 669 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 PDCL3Q9H2J4 239 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ANO10Q9NW15 660 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 EIF2B4Q9UI10 523 aaKnown RBP17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 SLCO3A1Q9UIG8 710 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 TMEM59LQ9UK28 342 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 NCKAP1Q9Y2A7 1128 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 SIK3Q9Y2K2 1263 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CABIN1Q9Y6J0 2220 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 KNL1Q8NG31 2342 aa17.6■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CACNA1BQ00975 2339 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 IGLV3-10A0A075B6K4 115 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 TTC34A8MYJ7 566 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 GOLGA6L22H0YM25 854 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ATP9BO43861 1147 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CER1O95813 267 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ADH1BP00325 375 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 PDGFRAP16234 1089 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 KCNA4P22459 653 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CD27P26842 260 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 GRIA4P48058 902 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 AFF3P51826 1226 aaKnown RBP17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 GSCP56915 257 aaPredicted RBP17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CDR2Q01850 454 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 BNC1Q01954 994 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 CENPCQ03188 943 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 NME3Q13232 169 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 FKBP15Q5T1M5 1219 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 FAM102AQ5T9C2 384 aaPredicted RBP17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 DBX2Q6ZNG2 339 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 FAM124AQ86V42 546 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 DHX40Q8IX18 779 aaKnown RBP17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 BIRC7Q96CA5 298 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 ORAI3Q9BRQ5 295 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 MTG2Q9H4K7 406 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 WDCPQ9H6R7 721 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 LIMA1Q9UHB6 759 aaKnown RBP17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 VANGL2Q9ULK5 521 aa17.59■□□□□ 0.41
MAP1LC3B-208ENST00000570189 SYNJ2BP-COX16A0A087WUM0 186 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 DRGXA6NNA5 263 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 I6L893 689 aaPredicted RBP17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ALOX15BO15296 676 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ENDOD1O94919 500 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ADCY5O95622 1261 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 MBD3O95983 291 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 MMEP08473 750 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ZNF18P17022 549 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 C5AR1P21730 350 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 MMP8P22894 467 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 MZF1P28698 734 aaPredicted RBP17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SOX5P35711 763 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 MYL5Q02045 173 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ZNF177Q13360 481 aaPredicted RBP17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 STX1AQ16623 288 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ARTNQ5T4W7 220 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 TRIM72Q6ZMU5 477 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SND1Q7KZF4 910 aaKnown RBP eCLIP17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SETD3Q86TU7 594 aaPredicted RBP17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CIR1Q86X95 450 aaPredicted RBP17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SPAG5Q96R06 1193 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 HAPLN3Q96S86 360 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 TKTL2Q9H0I9 626 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 VPS16Q9H269 839 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ANLNQ9NQW6 1124 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FANCLQ9NW38 375 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FBXL12Q9NXK8 326 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 COX16Q9P0S2 106 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 PCDHGB2Q9Y5G2 931 aa17.58■□□□□ 0.4
MAP1LC3B-208ENST00000570189 MID1O15344 667 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 IGHV4-34P06331 123 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 TFE3P19532 575 aaPredicted RBP17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FLT3P36888 993 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 STK19P49842 368 aaPredicted RBP17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SULT1E1P49888 294 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 IRAK1P51617 712 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 CCR5P51681 352 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 COPB1P53618 953 aaKnown RBP17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 FMO1Q01740 532 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 DEUP1Q05D60 604 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 TAF3Q5VWG9 929 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 KIAA0895LQ68EN5 471 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 SASS6Q6UVJ0 657 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 C14orf80Q86SX3 495 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ANKRD20A12PQ8NF67 263 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 OR52K2Q8NGK3 314 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 OR2I1PQ8NGU4 316 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 OR2T34Q8NGX1 318 aa17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 RPL10LQ96L21 214 aaKnown RBP17.57■□□□□ 0.4
MAP1LC3B-208ENST00000570189 ERGIC2Q96RQ1 377 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms