RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 AHI1Q8N157 1196 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 KCNV2Q8TDN2 545 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 ACDQ96AP0 544 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 FRMD8P1Q9BZ68 369 aaPredicted RBP24.08■■□□□ 1.45
RAB40C-212ENST00000569575 DNAJC17Q9NVM6 304 aaKnown RBP24.08■■□□□ 1.45
RAB40C-212ENST00000569575 KLHL11Q9NVR0 708 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 PLK2Q9NYY3 685 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 MRPS17Q9Y2R5 130 aaKnown RBP24.08■■□□□ 1.45
RAB40C-212ENST00000569575 SAR1BQ9Y6B6 198 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 PIAS3Q9Y6X2 628 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 COL4A2P08572 1712 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 ENC1O14682 589 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 ATP1A1P05023 1023 aaKnown RBP24.07■■□□□ 1.44
RAB40C-212ENST00000569575 RHOCP08134 193 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 CISD3P0C7P0 127 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 MX2P20592 715 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 GNA12Q03113 381 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 MMRN1Q13201 1228 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 TUBB2AQ13885 445 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 POLD3Q15054 466 aaPredicted RBP24.07■■□□□ 1.44
RAB40C-212ENST00000569575 AFMIDQ63HM1 303 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 CXorf57Q6NSI4 855 aaKnown RBP24.07■■□□□ 1.44
RAB40C-212ENST00000569575 RFX6Q8HWS3 928 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 PQLC3Q8N755 202 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 OSBPL9Q96SU4 736 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 P2RY13Q9BPV8 354 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 TUBB2BQ9BVA1 445 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 DNAI1Q9UI46 699 aa24.07■■□□□ 1.44
RAB40C-212ENST00000569575 CHD5Q8TDI0 1954 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 ZSCAN5CA6NGD5 496 aaPredicted RBP24.06■■□□□ 1.44
RAB40C-212ENST00000569575 ARHGAP42A6NI28 874 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 APOC4-APOC2K7ER74 178 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 NPC1O15118 1278 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 NARSO43776 548 aaKnown RBP24.06■■□□□ 1.44
RAB40C-212ENST00000569575 ZNF500O60304 480 aaPredicted RBP24.06■■□□□ 1.44
RAB40C-212ENST00000569575 APOC2P02655 101 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 PABPC1P11940 636 aaKnown RBP24.06■■□□□ 1.44
RAB40C-212ENST00000569575 DRD1P21728 446 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 OPRD1P41143 372 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 TNFRSF4P43489 277 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 VASPP50552 380 aaPredicted RBP24.06■■□□□ 1.44
RAB40C-212ENST00000569575 GEMIN4P57678 1058 aaKnown RBP24.06■■□□□ 1.44
RAB40C-212ENST00000569575 SLC20A2Q08357 652 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 MLF2Q15773 248 aaPredicted RBP24.06■■□□□ 1.44
RAB40C-212ENST00000569575 DCAF12L1Q5VU92 463 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 ANKS1BQ7Z6G8 1248 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 TFAP2DQ7Z6R9 452 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 METTL3Q86U44 580 aaKnown RBP24.06■■□□□ 1.44
RAB40C-212ENST00000569575 RASGEF1CQ8N431 466 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 LMLNQ96KR4 655 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 C16orf45Q96MC5 204 aaPredicted RBP24.06■■□□□ 1.44
RAB40C-212ENST00000569575 FEM1AQ9BSK4 669 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 C2orf49Q9BVC5 232 aaPredicted RBP24.06■■□□□ 1.44
RAB40C-212ENST00000569575 HEBP1Q9NRV9 189 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 HOMER3Q9NSC5 361 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 GGA2Q9UJY4 613 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 HPCAL4Q9UM19 191 aa24.06■■□□□ 1.44
RAB40C-212ENST00000569575 XIRP2A4UGR9 3374 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 CST8O60676 142 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 ASLP04424 464 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 APODP05090 189 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 HLA-FP30511 346 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 IRAK1P51617 712 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 FBXO43Q4G163 708 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 TMCO4Q5TGY1 634 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 NCBP2-AS2Q69YL0 99 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 ZNF852Q6ZMS4 543 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 PLD5Q8N7P1 536 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 ACTRT1Q8TDG2 376 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 UCMAQ8WVF2 138 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 P3H4Q92791 437 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 BHMTQ93088 406 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 UHRF1Q96T88 793 aaPredicted RBP24.05■■□□□ 1.44
RAB40C-212ENST00000569575 KLC2Q9H0B6 622 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 LRRC19Q9H756 370 aa24.05■■□□□ 1.44
RAB40C-212ENST00000569575 PRUNE2Q8WUY3 3088 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 EYSQ5T1H1 3165 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 ATP5BP06576 529 aaKnown RBP24.04■■□□□ 1.44
RAB40C-212ENST00000569575 STARD6P59095 220 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 GRSF1Q12849 480 aaKnown RBP eCLIP24.04■■□□□ 1.441e-7■■■■□ 24.1
RAB40C-212ENST00000569575 PLEKHG6Q3KR16 790 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 TMEM196Q5HYL7 178 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 SYT10Q6XYQ8 523 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 SLC13A5Q86YT5 568 aaPredicted RBP24.04■■□□□ 1.44
RAB40C-212ENST00000569575 NAT16Q8N8M0 369 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 TERB1Q8NA31 727 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 DCAF4L2Q8NA75 395 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 KDM1BQ8NB78 822 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 ARHGEF2Q92974 986 aaKnown RBP24.04■■□□□ 1.44
RAB40C-212ENST00000569575 FATE1Q969F0 183 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 TTC17Q96AE7 1141 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 ACE2Q9BYF1 805 aaPredicted RBP24.04■■□□□ 1.44
RAB40C-212ENST00000569575 MUC3BQ9H195 1237 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 ARHGEF3Q9NR81 526 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 ABCB8Q9NUT2 735 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 FBXL21Q9UKT6 434 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 STARD13Q9Y3M8 1113 aa24.04■■□□□ 1.44
RAB40C-212ENST00000569575 KIAA1549LQ6ZVL6 1849 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 ESPNB1AK53 854 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 KAT7O95251 611 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms