RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	MMS22L	Q6ZRQ5	1243 aa		11.78	□□□□□ -0.52
TCF4-238	ENST00000568169	IQCH	Q86VS3	1027 aa		11.78	□□□□□ -0.52
TCF4-238	ENST00000568169	ERICH1	Q86X53	443 aa		11.78	□□□□□ -0.52
TCF4-238	ENST00000568169	SPACA3	Q8IXA5	215 aa		11.78	□□□□□ -0.52
TCF4-238	ENST00000568169	CARNMT1	Q8N4J0	409 aa		11.78	□□□□□ -0.52
TCF4-238	ENST00000568169	TFAP2B	Q92481	460 aa		11.78	□□□□□ -0.52
TCF4-238	ENST00000568169	CFAP46	Q8IYW2	2715 aa		11.78	□□□□□ -0.52
TCF4-238	ENST00000568169	TBC1D3D	A0A087WVF3	549 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	TBC1D3I	A0A087WXS9	549 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	TBC1D3E	A0A087X179	549 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	TBC1D3K	A0A087X1G2	549 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	TBC1D3L	B9A6J9	549 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	MOCS3	O95396	460 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	FYN	P06241	537 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	TBC1D3H	P0C7X1	549 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	EPB41	P11171	864 aa	Known RBP	11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	MZF1	P28698	734 aa	Predicted RBP	11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	DRD3	P35462	400 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	NUDT1	P36639	197 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	RGS7	P49802	495 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	E2F1	Q01094	437 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	CFHR1	Q03591	330 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	CCDC173	Q0VFZ6	552 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	OVGP1	Q12889	678 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	NNT	Q13423	1086 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	ELAVL3	Q14576	367 aa	Known RBP	11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	DCAF6	Q58WW2	860 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	TBC1D3G	Q6DHY5	549 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	TBC1D3C	Q6IPX1	549 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	PRPF39	Q86UA1	669 aa	Known RBP	11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	APCDD1	Q8J025	514 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	CFAP52	Q8N1V2	620 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	SLC39A13	Q96H72	371 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	ZSWIM1	Q9BR11	485 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	NUCKS1	Q9H1E3	243 aa	Known RBP	11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	KDM4C	Q9H3R0	1056 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	ARHGAP20	Q9P2F6	1191 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	TLR6	Q9Y2C9	796 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	MYO18B	Q8IUG5	2567 aa		11.77	□□□□□ -0.53
TCF4-238	ENST00000568169	FAM237A	A0A1B0GTK4	181 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	CAPN8	A6NHC0	703 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	PIK3R2	O00459	728 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	TRIM38	O00635	465 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	CETN3	O15182	167 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	SLC7A4	O43246	635 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	SIGLEC6	O43699	453 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	MAGEC1	O60732	1142 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	IL1B	P01584	269 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	PAEP	P09466	180 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	SYK	P43405	635 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	ZNF211	Q13398	564 aa	Predicted RBP	11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	CNGA2	Q16280	664 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	RNF219	Q5W0B1	726 aa	Predicted RBP	11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	DQX1	Q8TE96	717 aa	Known RBP	11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	CLEC4C	Q8WTT0	213 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	RPL10L	Q96L21	214 aa	Known RBP	11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	HSFY1	Q96LI6	401 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	SERPINB11	Q96P15	392 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	CYTH4	Q9UIA0	394 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	DMTF1	Q9Y222	760 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	SPTA1	P02549	2419 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	KALRN	O60229	2985 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	MGA	Q8IWI9	3026 aa		11.76	□□□□□ -0.53
TCF4-238	ENST00000568169	ERVH48-1	M5A8F1	160 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	PLRG1	O43660	514 aa	Known RBP	11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	SDC3	O75056	442 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	FBXO21	O94952	628 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	MT-CO3	P00414	261 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	VAV1	P15498	845 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	TBXAS1	P24557	533 aa	Predicted RBP	11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	NNMT	P40261	264 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	STK19	P49842	368 aa	Predicted RBP	11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	NDUFA8	P51970	172 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	PLK1	P53350	603 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	METAP1	P53582	386 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	CXADR	P78310	365 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	KCNH2	Q12809	1159 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	PKP1	Q13835	747 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	TCERG1L	Q5VWI1	586 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	KDM7A	Q6ZMT4	941 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	TRIM69	Q86WT6	500 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	LGI2	Q8N0V4	545 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	SLC25A45	Q8N413	288 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	ZNF248	Q8NDW4	579 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	FRS2	Q8WU20	508 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	SNX21	Q969T3	373 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	WBP1	Q96G27	269 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	HIC2	Q96JB3	615 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	XPO7	Q9UIA9	1087 aa	Known RBP	11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	NAALADL1	Q9UQQ1	740 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	CEP83	Q9Y592	693 aa		11.75	□□□□□ -0.53
TCF4-238	ENST00000568169	DOCK4	Q8N1I0	1966 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169	PRAMEF26	H0Y7S4	382 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169		J3QKU1	62 aa		11.74	□□□□□ -0.53
TCF4-238	ENST00000568169		M0QYV0	167 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms