RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TAF5Q15542 800 aa15.46■□□□□ 0.07
RNF40-209ENST00000566703 ARHGAP44Q17R89 818 aa15.46■□□□□ 0.07
RNF40-209ENST00000566703 EXOC3L4Q17RC7 722 aa15.46■□□□□ 0.07
RNF40-209ENST00000566703 KCNT1Q5JUK3 1230 aa15.46■□□□□ 0.07
RNF40-209ENST00000566703 FBXL22Q6P050 247 aa15.46■□□□□ 0.07
RNF40-209ENST00000566703 C11orf57Q6ZUT1 292 aaPredicted RBP15.46■□□□□ 0.07
RNF40-209ENST00000566703 STK40Q8N2I9 435 aa15.46■□□□□ 0.07
RNF40-209ENST00000566703 RNF34Q969K3 372 aa15.46■□□□□ 0.07
RNF40-209ENST00000566703 FAM131CQ96AQ9 280 aa15.46■□□□□ 0.07
RNF40-209ENST00000566703 RPL10LQ96L21 214 aaKnown RBP15.46■□□□□ 0.07
RNF40-209ENST00000566703 SPAG5Q96R06 1193 aa15.46■□□□□ 0.07
RNF40-209ENST00000566703 ELF4Q99607 663 aaPredicted RBP15.46■□□□□ 0.07
RNF40-209ENST00000566703 CRACR2AQ9BSW2 395 aa15.46■□□□□ 0.07
RNF40-209ENST00000566703 ACP6Q9NPH0 428 aa15.46■□□□□ 0.07
RNF40-209ENST00000566703 DDIT4Q9NX09 232 aa15.46■□□□□ 0.07
RNF40-209ENST00000566703 NUMA1Q14980 2115 aa15.46■□□□□ 0.06
RNF40-209ENST00000566703 SLC7A4O43246 635 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 CDK4P11802 303 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 PRKCSHP14314 528 aaPredicted RBP15.45■□□□□ 0.06
RNF40-209ENST00000566703 PON1P27169 355 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 MZF1P28698 734 aaPredicted RBP15.45■□□□□ 0.06
RNF40-209ENST00000566703 CD38P28907 300 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 USP8P40818 1118 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 PITX1P78337 314 aaPredicted RBP15.45■□□□□ 0.06
RNF40-209ENST00000566703 KCNJ12Q14500 433 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 SLC45A4Q5BKX6 768 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 FAM46CQ5VWP2 391 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 GJB7Q6PEY0 223 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 DSG4Q86SJ6 1040 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 ZDHHC17Q8IUH5 632 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 AADATQ8N5Z0 425 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 ZNF397Q8NF99 534 aaPredicted RBP15.45■□□□□ 0.06
RNF40-209ENST00000566703 OR14C36Q8NHC7 312 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 FRS2Q8WU20 508 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 ALG14Q96F25 216 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 SLC6A18Q96N87 628 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 CPXM1Q96SM3 734 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 FAM204AQ9H8W3 233 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 ERVMER34-1Q9H9K5 563 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 EBF2Q9HAK2 575 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 RRN3Q9NYV6 651 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 RALYQ9UKM9 306 aaKnown RBP15.45■□□□□ 0.06
RNF40-209ENST00000566703 LHX6Q9UPM6 363 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 PCDHGA1Q9Y5H4 931 aa15.45■□□□□ 0.06
RNF40-209ENST00000566703 A0A1W2PR77 199 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 E9PAM4 449 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 LATO43561 262 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 ATP9BO43861 1147 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 IL1BP01584 269 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 WNT1P04628 370 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 PDGFRAP16234 1089 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 NOS2P35228 1153 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 KRT9P35527 623 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 PSMD8P48556 350 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 ADPRHP54922 357 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 BPIFB4P59827 614 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 AUHQ13825 339 aaKnown RBP15.44■□□□□ 0.06
RNF40-209ENST00000566703 SMAD1Q15797 465 aaKnown RBP15.44■□□□□ 0.06
RNF40-209ENST00000566703 C5orf22Q49AR2 442 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 CXorf57Q6NSI4 855 aaKnown RBP15.44■□□□□ 0.06
RNF40-209ENST00000566703 LAYNQ6UX15 382 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 SLC26A9Q7LBE3 791 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 PRPF39Q86UA1 669 aaKnown RBP15.44■□□□□ 0.06
RNF40-209ENST00000566703 IRF2BP1Q8IU81 584 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 CREBRFQ8IUR6 639 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 MLKLQ8NB16 471 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 OR8D1Q8WZ84 308 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 FEM1AQ9BSK4 669 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 AASDHPPTQ9NRN7 309 aa15.44■□□□□ 0.06
RNF40-209ENST00000566703 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.43■□□□□ 0.06
RNF40-209ENST00000566703 ALOX15BO15296 676 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 CLDN11O75508 207 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 ITGAVP06756 1048 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 C1SP09871 688 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 DRD3P35462 400 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 RXRGP48443 463 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 STK19P49842 368 aaPredicted RBP15.43■□□□□ 0.06
RNF40-209ENST00000566703 UBE2HP62256 183 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 SLC6A3Q01959 620 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 OVGP1Q12889 678 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 ZNF177Q13360 481 aaPredicted RBP15.43■□□□□ 0.06
RNF40-209ENST00000566703 ACBD5Q5T8D3 534 aaPredicted RBP15.43■□□□□ 0.06
RNF40-209ENST00000566703 OR6B2Q6IFH4 312 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 OLFML1Q6UWY5 402 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.43■□□□□ 0.06
RNF40-209ENST00000566703 IQCHQ86VS3 1027 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 OXR1Q8N573 874 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 MFSD2AQ8NA29 543 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 C1orf131Q8NDD1 294 aaKnown RBP15.43■□□□□ 0.06
RNF40-209ENST00000566703 SERAC1Q96JX3 654 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 RPRD1AQ96P16 312 aaPredicted RBP15.43■□□□□ 0.06
RNF40-209ENST00000566703 GDF3Q9NR23 364 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 FTSJ1Q9UET6 329 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 SLC25A13Q9UJS0 675 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 DMTF1Q9Y222 760 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 TBC1D30Q9Y2I9 924 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 OR51B4Q9Y5P0 310 aa15.43■□□□□ 0.06
RNF40-209ENST00000566703 TBC1D3DA0A087WVF3 549 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 TBC1D3IA0A087WXS9 549 aa15.42■□□□□ 0.06
RNF40-209ENST00000566703 TBC1D3EA0A087X179 549 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms