RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 MAN2B1O00754 1011 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 FGF10O15520 208 aaPredicted RBP8.39□□□□□ -1.07
CDH13-208ENST00000566333 DDX3YO15523 660 aaKnown RBP8.39□□□□□ -1.07
CDH13-208ENST00000566333 CHRNB1P11230 501 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 PABPC1P11940 636 aaKnown RBP8.39□□□□□ -1.07
CDH13-208ENST00000566333 MZF1P28698 734 aaPredicted RBP8.39□□□□□ -1.07
CDH13-208ENST00000566333 CSKP41240 450 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 GRIA2P42262 883 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 KIR2DL1P43626 348 aaPredicted RBP8.39□□□□□ -1.07
CDH13-208ENST00000566333 HCAR3P49019 387 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 MAPKAPK2P49137 400 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 NUMBP49757 651 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 PEX5P50542 639 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 ZNF135P52742 658 aaPredicted RBP8.39□□□□□ -1.07
CDH13-208ENST00000566333 GAS6Q14393 721 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 IFI16Q16666 785 aaKnown RBP8.39□□□□□ -1.07
CDH13-208ENST00000566333 PLEKHG6Q3KR16 790 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 PITRM1Q5JRX3 1037 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 AFMIDQ63HM1 303 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 RWDD4Q6NW29 188 aaKnown RBP8.39□□□□□ -1.07
CDH13-208ENST00000566333 PKN3Q6P5Z2 889 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 MFSD7Q6UXD7 560 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 LRRC31Q6UY01 552 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 SETD3Q86TU7 594 aaPredicted RBP8.39□□□□□ -1.07
CDH13-208ENST00000566333 VSIG1Q86XK7 387 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 ARHGAP12Q8IWW6 846 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 KATNAL2Q8IYT4 538 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 APCDD1Q8J025 514 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 C17orf53Q8N3J3 647 aaPredicted RBP8.39□□□□□ -1.07
CDH13-208ENST00000566333 PQLC3Q8N755 202 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 PCDH19Q8TAB3 1148 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 KIAA1524Q8TCG1 905 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 HES6Q96HZ4 224 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 SHDQ96IW2 340 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 PSMB7Q99436 277 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 HERPUD2Q9BSE4 406 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 LRRC19Q9H756 370 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 KCND1Q9NSA2 647 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.39□□□□□ -1.07
CDH13-208ENST00000566333 DLGAP2Q9P1A6 1054 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 NUMA1Q14980 2115 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 FRYLO94915 3013 aa8.39□□□□□ -1.07
CDH13-208ENST00000566333 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.38□□□□□ -1.07
CDH13-208ENST00000566333 LRRD1A4D1F6 860 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 FAM86C2PA6NEL3 165 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 H0Y626 953 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 FANCGO15287 622 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 MFSD11O43934 449 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 RNF40O75150 1001 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 APODP05090 189 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 RHOCP08134 193 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 TNNT1P13805 278 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 ERCC2P18074 760 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 AOC1P19801 751 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 DRD1P21728 446 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 AMPD1P23109 780 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 GLDCP23378 1020 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 KDELR1P24390 212 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 OR1E1P30953 314 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 ACVRL1P37023 503 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 ARL4AP40617 200 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 CDKN2BP42772 138 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 CTSOP43234 321 aaPredicted RBP8.38□□□□□ -1.07
CDH13-208ENST00000566333 PLK1P53350 603 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 NAP1L1P55209 391 aaKnown RBP8.38□□□□□ -1.07
CDH13-208ENST00000566333 AMPD2Q01433 879 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 GRSF1Q12849 480 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDH13-208ENST00000566333 ZNF177Q13360 481 aaPredicted RBP8.38□□□□□ -1.07
CDH13-208ENST00000566333 KRT81Q14533 505 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 UBXN2BQ14CS0 331 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 EIF4HQ15056 248 aaKnown RBP8.38□□□□□ -1.07
CDH13-208ENST00000566333 PDK2Q15119 407 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 PTPRNQ16849 979 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 ANKRD20A8PQ5CZ79 823 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 C6orf118Q5T5N4 469 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 EGFLAMQ63HQ2 1017 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 NCBP2-AS2Q69YL0 99 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 ZNF783Q6ZMS7 281 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 PEX26Q7Z412 305 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 TP53INP2Q8IXH6 220 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 SYCE1Q8N0S2 351 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 AHI1Q8N157 1196 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 UMODL1-AS1Q8N2C9 162 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 PLD5Q8N7P1 536 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 ZNF557Q8N988 423 aaPredicted RBP8.38□□□□□ -1.07
CDH13-208ENST00000566333 DCAF4L2Q8NA75 395 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 NETO2Q8NC67 525 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 TRIM58Q8NG06 486 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 OR7D4Q8NG98 312 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 WFIKKN2Q8TEU8 576 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 SORCS1Q8WY21 1168 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 CLDN23Q96B33 292 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 MYO19Q96H55 970 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 FEM1AQ9BSK4 669 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 CALN1Q9BXU9 219 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 OSBPL6Q9BZF3 934 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 RETREG1Q9H6L5 497 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 CATSPERBQ9H7T0 1116 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 C2orf42Q9NWW7 574 aa8.38□□□□□ -1.07
CDH13-208ENST00000566333 TRMT1Q9NXH9 659 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms