RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 IRAK1P51617 712 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 PLK1P53350 603 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 VSNL1P62760 191 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 PRKCQQ04759 706 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 DPYSQ14117 519 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 ASTLQ6HA08 431 aaPredicted RBP12.98□□□□□ -0.33
SF3B3-206ENST00000565990 SETD3Q86TU7 594 aaPredicted RBP12.98□□□□□ -0.33
SF3B3-206ENST00000565990 ZNF687Q8N1G0 1237 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 ZNF557Q8N988 423 aaPredicted RBP12.98□□□□□ -0.33
SF3B3-206ENST00000565990 KCTD6Q8NC69 237 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 EXD1Q8NHP7 514 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 TTC8Q8TAM2 541 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.98□□□□□ -0.33
SF3B3-206ENST00000565990 HSPH1Q92598 858 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 KRT35Q92764 455 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 EDAQ92838 391 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 TBC1D31Q96DN5 1066 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 XPO6Q96QU8 1125 aaKnown RBP12.98□□□□□ -0.33
SF3B3-206ENST00000565990 PNKPQ96T60 521 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 EPAS1Q99814 870 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 PRDM16Q9HAZ2 1276 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 HEBP1Q9NRV9 189 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 PLK2Q9NYY3 685 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 STIM2Q9P246 746 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.97□□□□□ -0.33
SF3B3-206ENST00000565990 EEF2KO00418 725 aaKnown RBP12.97□□□□□ -0.33
SF3B3-206ENST00000565990 MAN2B1O00754 1011 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 FGF10O15520 208 aaPredicted RBP12.97□□□□□ -0.33
SF3B3-206ENST00000565990 CREB3O43889 395 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 GOT1P17174 413 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 SOX9P48436 509 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 CDH6P55285 790 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 COPS2P61201 443 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 ZNF177Q13360 481 aaPredicted RBP12.97□□□□□ -0.33
SF3B3-206ENST00000565990 SLC12A1Q13621 1099 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 DPYSL3Q14195 570 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 MLF2Q15773 248 aaPredicted RBP12.97□□□□□ -0.33
SF3B3-206ENST00000565990 PPP6R3Q5H9R7 873 aaPredicted RBP12.97□□□□□ -0.33
SF3B3-206ENST00000565990 FSCBQ5H9T9 825 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 TXNDC11Q6PKC3 985 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 RFX8Q6ZV50 586 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 C12orf40Q86WS4 652 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 SUGP1Q8IWZ8 645 aaKnown RBP12.97□□□□□ -0.33
SF3B3-206ENST00000565990 UMODL1-AS1Q8N2C9 162 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.97□□□□□ -0.33
SF3B3-206ENST00000565990 NAT16Q8N8M0 369 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 EIF1ADQ8N9N8 165 aaKnown RBP12.97□□□□□ -0.33
SF3B3-206ENST00000565990 ALG3Q92685 438 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 CSPG4P5Q96PW8 444 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 ZNF670Q9BS34 389 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 KLC2Q9H0B6 622 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 CATSPERBQ9H7T0 1116 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 FBRSL1Q9HCM7 1045 aaKnown RBP12.97□□□□□ -0.33
SF3B3-206ENST00000565990 TMEM248Q9NWD8 314 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 MPP6Q9NZW5 540 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 ADAM21Q9UKJ8 722 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 EFR3BQ9Y2G0 817 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 PIAS3Q9Y6X2 628 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 F5P12259 2224 aa12.97□□□□□ -0.33
SF3B3-206ENST00000565990 TYW5A2RUC4 315 aaKnown RBP12.96□□□□□ -0.33
SF3B3-206ENST00000565990 KRBA1A5PL33 1030 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.96□□□□□ -0.33
SF3B3-206ENST00000565990 PI4K2BG5E9Z4 385 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 H3BRJ5 948 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 FTCDO95954 541 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 ATP1A1P05023 1023 aaKnown RBP12.96□□□□□ -0.33
SF3B3-206ENST00000565990 ALADP13716 330 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 ERCC2P18074 760 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 EPHB2P29323 1055 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 HLA-FP30511 346 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 CDKN2BP42772 138 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 MARCKSL1P49006 195 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 MAPKAPK2P49137 400 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 DGKGP49619 791 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 OXCT1P55809 520 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 RWDD2BP57060 319 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 KRT81Q14533 505 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 PREPLQ4J6C6 727 aaPredicted RBP12.96□□□□□ -0.33
SF3B3-206ENST00000565990 ANKRD20A8PQ5CZ79 823 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 AFMIDQ63HM1 303 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 CXorf57Q6NSI4 855 aaKnown RBP12.96□□□□□ -0.33
SF3B3-206ENST00000565990 ZNF783Q6ZMS7 281 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 ANKS1BQ7Z6G8 1248 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 RTL3Q8N8U3 475 aaKnown RBP12.96□□□□□ -0.33
SF3B3-206ENST00000565990 PCDH19Q8TAB3 1148 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 FAM3CQ92520 227 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 ALG14Q96F25 216 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 NELL2Q99435 816 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 P2RY13Q9BPV8 354 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 TLR10Q9BXR5 811 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 NDFIP2Q9NV92 336 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 DONSONQ9NYP3 566 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 KIAA1522Q9P206 1035 aaPredicted RBP12.96□□□□□ -0.33
SF3B3-206ENST00000565990 DEC1Q9P2X7 70 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 STARD13Q9Y3M8 1113 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 OR51B4Q9Y5P0 310 aa12.96□□□□□ -0.33
SF3B3-206ENST00000565990 MYO18AQ92614 2054 aaKnown RBP12.95□□□□□ -0.34
SF3B3-206ENST00000565990 CXorf51AA0A1B0GTR3 108 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 ILVBLA1L0T0 632 aa12.95□□□□□ -0.34
SF3B3-206ENST00000565990 LRRD1A4D1F6 860 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms