RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 WDR83Q9BRX9 315 aaKnown RBP20.05■□□□□ 0.8
CLN6-205ENST00000564846 PPCSQ9HAB8 311 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 NDFIP2Q9NV92 336 aa20.05■□□□□ 0.8
CLN6-205ENST00000564846 SMIM23A6NLE4 172 aa20.04■□□□□ 0.8
CLN6-205ENST00000564846 ACSL4O60488 711 aa20.04■□□□□ 0.8
CLN6-205ENST00000564846 MAFKO60675 156 aa20.04■□□□□ 0.8
CLN6-205ENST00000564846 AGTP01019 485 aa20.04■□□□□ 0.8
CLN6-205ENST00000564846 NR1D1P20393 614 aa20.04■□□□□ 0.8
CLN6-205ENST00000564846 PSMB4P28070 264 aa20.04■□□□□ 0.8
CLN6-205ENST00000564846 MAGEA3P43357 314 aa20.04■□□□□ 0.8
CLN6-205ENST00000564846 SLCO1A2P46721 670 aa20.04■□□□□ 0.8
CLN6-205ENST00000564846 LBHD1Q9BQE6 289 aaPredicted RBP20.04■□□□□ 0.8
CLN6-205ENST00000564846 RETREG1Q9H6L5 497 aa20.04■□□□□ 0.8
CLN6-205ENST00000564846 F5H5T6 163 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 AVILO75366 819 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 SPAG6O75602 509 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 SPATA31D3P0C874 917 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 TACR2P21452 398 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 ELK3P41970 407 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 GPX6P59796 221 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 ZBTB17Q13105 803 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 TERF2Q15554 542 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 ALFQ53S48 1182 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 NADSYN1Q6IA69 706 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 SPATA31D4Q6ZUB0 917 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 C3orf62Q6ZUJ4 267 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 ARFGAP2Q8N6H7 521 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 PDCD7Q8N8D1 485 aaKnown RBP20.03■□□□□ 0.8
CLN6-205ENST00000564846 ZSCAN18Q8TBC5 510 aaPredicted RBP20.03■□□□□ 0.8
CLN6-205ENST00000564846 IGSF8Q969P0 613 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 TEKT5Q96M29 485 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 RPRD1AQ96P16 312 aaPredicted RBP20.03■□□□□ 0.8
CLN6-205ENST00000564846 GBA3Q9H227 469 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 ENTPD7Q9NQZ7 604 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 RSPH14Q9UHP6 348 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 MATN3O15232 486 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 ZBTB24O43167 697 aaPredicted RBP20.03■□□□□ 0.8
CLN6-205ENST00000564846 CDH16O75309 829 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 JCHAINP01591 159 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 LRG1P02750 347 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 F11P03951 625 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 ATP5DP30049 168 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 PAPOLAP51003 745 aaKnown RBP20.03■□□□□ 0.8
CLN6-205ENST00000564846 ERVFC1P60507 584 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 MAGOHP61326 146 aaKnown RBP20.03■□□□□ 0.8
CLN6-205ENST00000564846 IFI35P80217 286 aaPredicted RBP20.03■□□□□ 0.8
CLN6-205ENST00000564846 UBE3AQ05086 875 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 MTM1Q13496 603 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 C5orf22Q49AR2 442 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 TNFAIP8L3Q5GJ75 292 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 KDM7AQ6ZMT4 941 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 ZNF534Q76KX8 674 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 TMEM150AQ86TG1 271 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 RIBC1Q8N443 379 aaPredicted RBP20.03■□□□□ 0.8
CLN6-205ENST00000564846 AGAP3Q96P47 875 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 RNF38Q9H0F5 515 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 ALG13Q9NP73 1137 aaKnown RBP20.03■□□□□ 0.8
CLN6-205ENST00000564846 FETUBQ9UGM5 382 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 CHMP2BQ9UQN3 213 aa20.03■□□□□ 0.8
CLN6-205ENST00000564846 EXOC1LA0A1B0GW35 172 aa20.02■□□□□ 0.8
CLN6-205ENST00000564846 ERI2A8K979 691 aaKnown RBP20.02■□□□□ 0.8
CLN6-205ENST00000564846 CNTN5O94779 1100 aa20.02■□□□□ 0.8
CLN6-205ENST00000564846 CCNB1P14635 433 aa20.02■□□□□ 0.8
CLN6-205ENST00000564846 SSTR1P30872 391 aa20.02■□□□□ 0.8
CLN6-205ENST00000564846 LRRC8BQ6P9F7 803 aa20.02■□□□□ 0.8
CLN6-205ENST00000564846 ARHGAP36Q6ZRI8 547 aa20.02■□□□□ 0.8
CLN6-205ENST00000564846 TFAP2DQ7Z6R9 452 aa20.02■□□□□ 0.8
CLN6-205ENST00000564846 MRPL43Q8N983 215 aaKnown RBP20.02■□□□□ 0.8
CLN6-205ENST00000564846 FATE1Q969F0 183 aa20.02■□□□□ 0.8
CLN6-205ENST00000564846 KLF16Q9BXK1 252 aaPredicted RBP20.02■□□□□ 0.8
CLN6-205ENST00000564846 NOL6Q9H6R4 1146 aaKnown RBP20.02■□□□□ 0.8
CLN6-205ENST00000564846 ZNF334Q9HCZ1 680 aaPredicted RBP20.02■□□□□ 0.8
CLN6-205ENST00000564846 PSD3Q9NYI0 1048 aa20.02■□□□□ 0.8
CLN6-205ENST00000564846 LINC01553A4QN01 128 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 C2orf78A6NCI8 922 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 ARHGAP42A6NI28 874 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 STC2O76061 302 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 C8AP07357 584 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 CD68P34810 354 aaPredicted RBP20.01■□□□□ 0.79
CLN6-205ENST00000564846 MAPKAPK2P49137 400 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 IRAK1P51617 712 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 SKOR1P84550 965 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 SKIDA1Q1XH10 827 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 ANO4Q32M45 955 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 CAPN12Q6ZSI9 719 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 TDRPQ86YL5 185 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 IGDCC3Q8IVU1 814 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 KREMEN2Q8NCW0 462 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 POF1BQ8WVV4 589 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 IL12RB2Q99665 862 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 IL21Q9HBE4 155 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 ZNF212Q9UDV6 495 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 LGALS13Q9UHV8 139 aa20.01■□□□□ 0.79
CLN6-205ENST00000564846 IPO11Q9UI26 975 aaKnown RBP20.01■□□□□ 0.79
CLN6-205ENST00000564846 GOLGA6L7A0A1B0GV03 622 aa20■□□□□ 0.79
CLN6-205ENST00000564846 C2orf71A6NGG8 1288 aa20■□□□□ 0.79
CLN6-205ENST00000564846 F5H423 210 aaPredicted RBP20■□□□□ 0.79
CLN6-205ENST00000564846 PRPSAP1Q14558 356 aa20■□□□□ 0.79
CLN6-205ENST00000564846 KLHL38Q2WGJ6 581 aa20■□□□□ 0.79
CLN6-205ENST00000564846 FAM133BQ5BKY9 247 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms