RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ZNF212Q9UDV6 495 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 RAD54BQ9Y620 910 aa13.27□□□□□ -0.29
SPG7-209ENST00000564047 A0A1B0GVM2 712 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 CTAGE15A4D2H0 777 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 TCAF2A6NFQ2 919 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 TRDMT1O14717 391 aaKnown RBP13.26□□□□□ -0.29
SPG7-209ENST00000564047 ECI2O75521 394 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 CNTN5O94779 1100 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 CYBBP04839 570 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 CTAGE8P0CG41 777 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 IFNAR2P48551 515 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 SGSHP51688 502 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 VCPP55072 806 aaKnown RBP13.26□□□□□ -0.29
SPG7-209ENST00000564047 RPS24P62847 133 aaKnown RBP13.26□□□□□ -0.29
SPG7-209ENST00000564047 OTUD4Q01804 1114 aaKnown RBP13.26□□□□□ -0.29
SPG7-209ENST00000564047 FCHO2Q0JRZ9 810 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 NOMO1Q15155 1222 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 PDGFRLQ15198 375 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 CYP1B1Q16678 543 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 C1orf228Q6PIY5 440 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 VITQ6UXI7 678 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 TRIM67Q6ZTA4 783 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 CTAGE6Q86UF2 777 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 MFSD6LQ8IWD5 586 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 CTAGE4Q8IX94 777 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 ADGRG2Q8IZP9 1017 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 CFAP52Q8N1V2 620 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 UMODL1-AS1Q8N2C9 162 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 C12orf50Q8NA57 414 aaPredicted RBP13.26□□□□□ -0.29
SPG7-209ENST00000564047 DEPDC1BQ8WUY9 529 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 DOCK6Q96HP0 2047 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 KLC2Q9H0B6 622 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 LINC00597Q9H2U6 94 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 DUS2Q9NX74 493 aaKnown RBP13.26□□□□□ -0.29
SPG7-209ENST00000564047 FAM53CQ9NYF3 392 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 DTLQ9NZJ0 730 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 MARK1Q9P0L2 795 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 NR2E1Q9Y466 385 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 MFHAS1Q9Y4C4 1052 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 WNT6Q9Y6F9 365 aa13.26□□□□□ -0.29
SPG7-209ENST00000564047 DENND4AQ7Z401 1863 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 NUP210Q8TEM1 1887 aaPredicted RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 ANHXE9PGG2 379 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 NCAM2O15394 837 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 MFSD11O43934 449 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 TBL1XO60907 577 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 PHF2O75151 1096 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 PECAM1P16284 738 aaPredicted RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 PSMC3P17980 439 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 CLCN6P51797 869 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 NDST2P52849 883 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 YBEYP58557 167 aaPredicted RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 GBE1Q04446 702 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 ZNF177Q13360 481 aaPredicted RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 XRCC4Q13426 336 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 EML3Q32P44 896 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 TEX35Q5T0J7 233 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 AFMIDQ63HM1 303 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 RNF43Q68DV7 783 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 DRICH1Q6PGQ1 229 aaPredicted RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 PARM1Q6UWI2 310 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 NPNTQ6UXI9 565 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 TFAP2DQ7Z6R9 452 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 CIR1Q86X95 450 aaPredicted RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 YAF2Q8IY57 180 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 PLCD3Q8N3E9 789 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 FBXL6Q8N531 539 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 NPWQ8N729 165 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 SLC35B2Q8TB61 432 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 ACTL9Q8TC94 416 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 DDI1Q8WTU0 396 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 C1orf54Q8WWF1 131 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 ATOH1Q92858 354 aaPredicted RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 FGF14Q92915 247 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 IRF7Q92985 503 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 NKD2Q969F2 451 aaPredicted RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 HAUS1Q96CS2 278 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 FAM83CQ9BQN1 747 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 PHF7Q9BWX1 381 aaPredicted RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 LRRC19Q9H756 370 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 SPHK2Q9NRA0 654 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 FAM86C1Q9NVL1 165 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 SAE1Q9UBE0 346 aaPredicted RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 TBC1D30Q9Y2I9 924 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 R3HDM2Q9Y2K5 976 aaKnown RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 HEY1Q9Y5J3 304 aa13.25□□□□□ -0.29
SPG7-209ENST00000564047 HELZP42694 1942 aaKnown RBP13.25□□□□□ -0.29
SPG7-209ENST00000564047 MCF2LO15068 1137 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 LIASO43766 372 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 LUC7L3O95232 432 aaKnown RBP13.24□□□□□ -0.29
SPG7-209ENST00000564047 NFATC1O95644 943 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 PENKP01210 267 aaPredicted RBP13.24□□□□□ -0.29
SPG7-209ENST00000564047 MX2P20592 715 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 HOXD9P28356 352 aaPredicted RBP13.24□□□□□ -0.29
SPG7-209ENST00000564047 OR1E1P30953 314 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 CHRNA3P32297 505 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 FNTAP49354 379 aa13.24□□□□□ -0.29
SPG7-209ENST00000564047 SLC10A2Q12908 348 aaPredicted RBP13.24□□□□□ -0.29
SPG7-209ENST00000564047 HTR4Q13639 388 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms