RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ZNF75CPQ92670 426 aaPredicted RBP19.57■□□□□ 0.72
SMPD3-203ENST00000563226 TEKT5Q96M29 485 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 SERPINB11Q96P15 392 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 FAM111AQ96PZ2 611 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 APOL2Q9BQE5 337 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 KDM4CQ9H3R0 1056 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 UBP1Q9NZI7 540 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 MPP6Q9NZW5 540 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 OR6C75A6NL08 312 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 MTSS1O43312 755 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 CPB1P15086 417 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 ATN1P54259 1190 aaPredicted RBP19.56■□□□□ 0.72
SMPD3-203ENST00000563226 CCL23P55773 120 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 MGAT5Q09328 741 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 SEPT7Q16181 437 aaKnown RBP19.56■□□□□ 0.72
SMPD3-203ENST00000563226 MROH9Q5TGP6 573 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 PIK3R6Q5UE93 754 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 RNF19BQ6ZMZ0 732 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 OTOP3Q7RTS5 596 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 TRPM8Q7Z2W7 1104 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 NPAS4Q8IUM7 802 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 MICALL1Q8N3F8 863 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 SLC39A8Q9C0K1 460 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 FBXO44Q9H4M3 255 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 TRHDEQ9UKU6 1024 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 MTMR11A4FU01 709 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 ARHGAP42A6NI28 874 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 TBKBP1A7MCY6 615 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 E9PAM4 449 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 EDF1O60869 148 aaKnown RBP19.56■□□□□ 0.72
SMPD3-203ENST00000563226 FSBPO95073 299 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 TBX18O95935 607 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 GALTP07902 379 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 TUBP50607 506 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 ACTN3Q08043 901 aaPredicted RBP19.56■□□□□ 0.72
SMPD3-203ENST00000563226 LACTB2Q53H82 288 aaPredicted RBP19.56■□□□□ 0.72
SMPD3-203ENST00000563226 MSANTD2Q6P1R3 559 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 PTPRN2Q92932 1015 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 SLC39A13Q96H72 371 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 RMDN2Q96LZ7 410 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 FCRL3Q96P31 734 aaPredicted RBP19.56■□□□□ 0.72
SMPD3-203ENST00000563226 CASS4Q9NQ75 786 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 IL37Q9NZH6 218 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 ARL2BPQ9Y2Y0 163 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 CAPN7Q9Y6W3 813 aa19.56■□□□□ 0.72
SMPD3-203ENST00000563226 ZNF189O75820 626 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-203ENST00000563226 DHRS4L1P0CG22 281 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 ALADP13716 330 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 ARHGEF6Q15052 776 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 CYS1Q717R9 158 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 MARK2Q7KZI7 788 aaKnown RBP19.55■□□□□ 0.72
SMPD3-203ENST00000563226 ATPAF2Q8N5M1 289 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 CCDC63Q8NA47 563 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 TTC17Q96AE7 1141 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 SRPK1Q96SB4 655 aaKnown RBP19.55■□□□□ 0.72
SMPD3-203ENST00000563226 SEPT5Q99719 369 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-203ENST00000563226 PAK6Q9NQU5 681 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-203ENST00000563226 MAGED2Q9UNF1 606 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-203ENST00000563226 TLR6Q9Y2C9 796 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 PSAT1Q9Y617 370 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 DOCK4Q8N1I0 1966 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 COPEO14579 308 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 FGF10O15520 208 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-203ENST00000563226 KRT38O76015 456 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 CCNFP41002 786 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 EFEMP1Q12805 493 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 MGAT5BQ3V5L5 792 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 ITPRIPL1Q6GPH6 555 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 VAT1Q99536 393 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 CATSPERBQ9H7T0 1116 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 VANGL2Q9ULK5 521 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 STARD13Q9Y3M8 1113 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 RPS6KL1Q9Y6S9 549 aa19.55■□□□□ 0.72
SMPD3-203ENST00000563226 MICAL3Q7RTP6 2002 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 TBC1D4O60343 1298 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 MAFKO60675 156 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 YWHAQP27348 245 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 SCTRP47872 440 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 TBX4P57082 545 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 COG7P83436 770 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 CERCAMQ5T4B2 595 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 LGSNQ5TDP6 509 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 PRSS55Q6UWB4 352 aaPredicted RBP19.54■□□□□ 0.72
SMPD3-203ENST00000563226 DNAAF3Q8N9W5 541 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 FBXO32Q969P5 355 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 TSGA13Q96PP4 275 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 PPP1R12CQ9BZL4 782 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 PCMTD2Q9NV79 361 aa19.54■□□□□ 0.72
SMPD3-203ENST00000563226 FAM92AA1XBS5 289 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 TOP3BO95985 862 aaKnown RBP19.53■□□□□ 0.72
SMPD3-203ENST00000563226 ERVK-10P10266 1014 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 CCNB1P14635 433 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 CCNCP24863 283 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 MLLT6P55198 1093 aaPredicted RBP19.53■□□□□ 0.72
SMPD3-203ENST00000563226 TAF10Q12962 218 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 GPR17Q13304 367 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 RASIP1Q5U651 963 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 PACS1Q6VY07 963 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 OTOAQ7RTW8 1153 aa19.53■□□□□ 0.72
SMPD3-203ENST00000563226 CCNJLQ8IV13 435 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms