RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 SIPA1Q96FS4 1042 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 RPL10LQ96L21 214 aaKnown RBP16.6■□□□□ 0.25
COMMD4-206ENST00000562610 C1orf74Q96LT6 269 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 PPP1R9BQ96SB3 815 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 SEMA4GQ9NTN9 838 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 PARVAQ9NVD7 372 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 MPP6Q9NZW5 540 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 VPS28Q9UK41 221 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 BZW2Q9Y6E2 419 aaKnown RBP16.6■□□□□ 0.25
COMMD4-206ENST00000562610 CFAP54Q96N23 3096 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 TP53BP1Q12888 1972 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-206ENST00000562610 ZNF292O60281 2723 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 IGHV1OR15-9A0A0B4J2B8 117 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 LRP3O75074 770 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 RTN2O75298 545 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 FTLP02792 175 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-206ENST00000562610 SERPING1P05155 500 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 GZMAP12544 262 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 ADRA1BP35368 520 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 MPLP40238 635 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 PI4KAP42356 2102 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 SULT2A1Q06520 285 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 PPP1R15BQ5SWA1 713 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 HGSNATQ68CP4 663 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 SCYL2Q6P3W7 929 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 SLC36A4Q6YBV0 504 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 CYP2U1Q7Z449 544 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 TMEFF1Q8IYR6 380 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 ZNF683Q8IZ20 524 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 OR52K2Q8NGK3 314 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 CENPIQ92674 756 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-206ENST00000562610 TRIM11Q96F44 468 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 MYO19Q96H55 970 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 MRGPRX3Q96LB0 322 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 CNPY3Q9BT09 278 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 ZYG11BQ9C0D3 744 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 MTG2Q9H4K7 406 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 PRSS16Q9NQE7 514 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 CNOT8Q9UFF9 292 aaKnown RBP16.59■□□□□ 0.25
COMMD4-206ENST00000562610 SUN2Q9UH99 717 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 SLC25A13Q9UJS0 675 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 PCDHGA5Q9Y5G8 931 aa16.59■□□□□ 0.25
COMMD4-206ENST00000562610 NUMA1Q14980 2115 aa16.58■□□□□ 0.25
COMMD4-206ENST00000562610 IGLV3-10A0A075B6K4 115 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 AP5Z1O43299 807 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 NDUFS2O75306 463 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 PLEKP08567 350 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-206ENST00000562610 PSMA2P25787 234 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 OR1E1P30953 314 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 NNMTP40261 264 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 MAMLD1Q13495 774 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 TRIM14Q14142 442 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 SPECC1LQ69YQ0 1117 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 TMC6Q7Z403 805 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 DEFB119Q8N690 84 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 FEM1AQ9BSK4 669 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 SMOC1Q9H4F8 434 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 FBRSQ9HAH7 460 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 MYO1AQ9UBC5 1043 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 OR12D3Q9UGF7 316 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 ADAMTS1Q9UHI8 967 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 TBC1D30Q9Y2I9 924 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.58■□□□□ 0.24
COMMD4-206ENST00000562610 SCINQ9Y6U3 715 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 WDR87Q6ZQQ6 2873 aa16.58■□□□□ 0.24
COMMD4-206ENST00000562610 ATXN2Q99700 1313 aaKnown RBP16.57■□□□□ 0.24
COMMD4-206ENST00000562610 EDDM13A0A1B0GTR0 161 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 DRGXA6NNA5 263 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 TTC34A8MYJ7 566 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 SIN3BO75182 1162 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 TPM1P09493 284 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 PLK1P53350 603 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 OGDHQ02218 1023 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 LMNB2Q03252 620 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 CSRP2Q16527 193 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 HNRNPA1L2Q32P51 320 aaKnown RBP16.57■□□□□ 0.24
COMMD4-206ENST00000562610 EFHC2Q5JST6 749 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 C6orf118Q5T5N4 469 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 ZNF776Q68DI1 518 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-206ENST00000562610 PLEKHA7Q6IQ23 1121 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 RWDD4Q6NW29 188 aaKnown RBP16.57■□□□□ 0.24
COMMD4-206ENST00000562610 PRR23CQ6ZRP0 262 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 SLFN11Q7Z7L1 901 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 SETD3Q86TU7 594 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-206ENST00000562610 DRC7Q8IY82 874 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 C12orf50Q8NA57 414 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-206ENST00000562610 KDM1BQ8NB78 822 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 NTAN1Q96AB6 310 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 USP36Q9P275 1121 aaKnown RBP16.57■□□□□ 0.24
COMMD4-206ENST00000562610 SLCO3A1Q9UIG8 710 aa16.57■□□□□ 0.24
COMMD4-206ENST00000562610 BCLAF3A2AJT9 711 aaKnown RBP16.56■□□□□ 0.24
COMMD4-206ENST00000562610 DNTTP04053 509 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 MYBL1P10243 752 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 TGM1P22735 817 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 CD6P30203 668 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 PTGER3P43115 390 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 TPMTP51580 245 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 KRT83P78385 493 aa16.56■□□□□ 0.24
COMMD4-206ENST00000562610 SF3A2Q15428 464 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms