RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 BRD8Q9H0E9 1235 aa11.14□□□□□ -0.63
AC009054.2-201ENST00000561956 NOL6Q9H6R4 1146 aaKnown RBP11.14□□□□□ -0.63
AC009054.2-201ENST00000561956 C10orf88Q9H8K7 445 aa11.14□□□□□ -0.63
AC009054.2-201ENST00000561956 TRPV4Q9HBA0 871 aa11.14□□□□□ -0.63
AC009054.2-201ENST00000561956 USP29Q9HBJ7 922 aa11.14□□□□□ -0.63
AC009054.2-201ENST00000561956 CDH7Q9ULB5 785 aa11.14□□□□□ -0.63
AC009054.2-201ENST00000561956 ZFP37Q9Y6Q3 630 aaPredicted RBP11.14□□□□□ -0.63
AC009054.2-201ENST00000561956 NYNRINQ9P2P1 1898 aaKnown RBP11.14□□□□□ -0.63
AC009054.2-201ENST00000561956 SZT2Q5T011 3432 aa11.14□□□□□ -0.63
AC009054.2-201ENST00000561956 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 ZSCAN5CA6NGD5 496 aaPredicted RBP11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 ZNF189O75820 626 aaPredicted RBP11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 VAV1P15498 845 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 RBL1P28749 1068 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 CHKAP35790 457 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 GARSP41250 739 aaKnown RBP11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 GDF10P55107 478 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 GUCY2DQ02846 1103 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 PPIDQ08752 370 aaKnown RBP11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 PPP1R7Q15435 360 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 FAM78AQ5JUQ0 283 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 RNF43Q68DV7 783 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 DUPD1Q68J44 220 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 B4GALNT4Q76KP1 1039 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 GSTA5Q7RTV2 222 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 CFAP52Q8N1V2 620 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 MICALL1Q8N3F8 863 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 FAM71DQ8N9W8 422 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 TDRD5Q8NAT2 981 aaKnown RBP11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 GLIS1Q8NBF1 620 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 TTC16Q8NEE8 873 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 LRRN4Q8WUT4 740 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 TFB1MQ8WVM0 346 aaKnown RBP11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 RSAD2Q8WXG1 361 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 SMARCD2Q92925 531 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 RSPRY1Q96DX4 576 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 P2RY11Q96G91 374 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 LGMNQ99538 433 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 ERP44Q9BS26 406 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 SLC39A8Q9C0K1 460 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 RAB17Q9H0T7 212 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 PCDH9Q9HC56 1237 aa11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 UTP11Q9Y3A2 253 aaKnown RBP11.13□□□□□ -0.63
AC009054.2-201ENST00000561956 SHROOM3Q8TF72 1996 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 TYW5A2RUC4 315 aaKnown RBP11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 RASA4BC9J798 803 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 SGK1O00141 431 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 KCNN4O15554 427 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 RASA4O43374 803 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 TBL1XO60907 577 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 KRT14P02533 472 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 FCARP24071 287 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 TNFRSF8P28908 595 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 OR1E1P30953 314 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 STIP1P31948 543 aaKnown RBP11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 YBEYP58557 167 aaPredicted RBP11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 ZNF33AQ06730 810 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 KCTD19Q17RG1 926 aaPredicted RBP11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 PARP15Q460N3 678 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 MPPE1Q53F39 396 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 MPP7Q5T2T1 576 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 HEATR6Q6AI08 1181 aaKnown RBP11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 GPR153Q6NV75 609 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 WDR93Q6P2C0 686 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 EP400NLQ6ZTU2 488 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 LRRC49Q8IUZ0 686 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 ATPAF2Q8N5M1 289 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 SMRP1Q8NCR6 262 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 HTR3CQ8WXA8 447 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 CASKIN2Q8WXE0 1202 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 OTUB2Q96DC9 234 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 TMA16Q96EY4 203 aaKnown RBP11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 LRRC3BQ96PB8 259 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 TSGA13Q96PP4 275 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 MYADMQ96S97 322 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 EPB41L5Q9HCM4 733 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 GDF3Q9NR23 364 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 OBP2AQ9NY56 170 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 TBC1D14Q9P2M4 693 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 RAB21Q9UL25 225 aa11.12□□□□□ -0.63
AC009054.2-201ENST00000561956 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 ESYT3A0FGR9 886 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 ILVBLA1L0T0 632 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 ARHGAP42A6NI28 874 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 DFFAO00273 331 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 SLC9A3R1O14745 358 aaPredicted RBP11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 RAMP2O60895 175 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 LUC7L3O95232 432 aaKnown RBP11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 IFNB1P01574 187 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 TUBBP07437 444 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 RHOCP08134 193 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 ZSCAN5DPP0CG00 497 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 ETS1P14921 441 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 CCNCP24863 283 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 IVDP26440 423 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 HOXD9P28356 352 aaPredicted RBP11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 VIPR2P41587 438 aa11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 PAPOLAP51003 745 aaKnown RBP11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 DRG2P55039 364 aaKnown RBP11.11□□□□□ -0.63
AC009054.2-201ENST00000561956 VSNL1P62760 191 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms