RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 KLRF2D3W0D1 207 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 E9PAM4 449 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 CBX4O00257 560 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 PLK4O00444 970 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 TRDMT1O14717 391 aaKnown RBP4.16□□□□□ -1.74
HERC1-211ENST00000560983 MAGEB2O15479 319 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 TOX4O94842 621 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 EGFP01133 1207 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 JUNP05412 331 aaKnown RBP4.16□□□□□ -1.74
HERC1-211ENST00000560983 SERPINF2P08697 491 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 ATXN1LP0C7T5 689 aaKnown RBP4.16□□□□□ -1.74
HERC1-211ENST00000560983 GJA1P17302 382 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 HOXA11P31270 313 aaPredicted RBP4.16□□□□□ -1.74
HERC1-211ENST00000560983 DGKEP52429 567 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 CXADRP78310 365 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 RHDQ02161 417 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 CREMQ03060 361 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 ELAVL1Q15717 326 aaKnown RBP4.16□□□□□ -1.74
HERC1-211ENST00000560983 SMAD1Q15797 465 aaKnown RBP4.16□□□□□ -1.74
HERC1-211ENST00000560983 SWSAP1Q6NVH7 229 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 ESRP1Q6NXG1 681 aaKnown RBP4.16□□□□□ -1.74
HERC1-211ENST00000560983 ZNF662Q6ZS27 426 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 MRGPREQ86SM8 312 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 RASSF3Q86WH2 238 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 NAXDQ8IW45 347 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 KIAA1958Q8N8K9 716 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 MDGA1Q8NFP4 955 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 OLIG1Q8TAK6 271 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 MED8Q96G25 268 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 DYDC2Q96IM9 177 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 WDR92Q96MX6 357 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 GAD1Q99259 594 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 PAAF1Q9BRP4 392 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 PI4K2AQ9BTU6 479 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 RIOX1Q9H6W3 641 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 TOMM22Q9NS69 142 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 MAD2L2Q9UI95 211 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 PIN4Q9Y237 131 aaKnown RBP4.16□□□□□ -1.74
HERC1-211ENST00000560983 PAXBP1Q9Y5B6 917 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 BOD1L1Q8NFC6 3051 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 NFASCO94856 1347 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 ZMYM6O95789 1325 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 SALL3Q9BXA9 1300 aa4.16□□□□□ -1.74
HERC1-211ENST00000560983 COL4A2P08572 1712 aa4.15□□□□□ -1.74
HERC1-211ENST00000560983 A0A087WZ62 844 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 A0A0A6YYK5 440 aaPredicted RBP4.15□□□□□ -1.75
HERC1-211ENST00000560983 ZNF197O14709 1029 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 RRP8O43159 456 aaKnown RBP4.15□□□□□ -1.75
HERC1-211ENST00000560983 RAB11FIP3O75154 756 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 TADA2AO75478 443 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 CFIP05156 583 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 HLA-EP13747 358 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 NR4A1P22736 598 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 PROZP22891 400 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 PTX3P26022 381 aaPredicted RBP4.15□□□□□ -1.75
HERC1-211ENST00000560983 OR1D2P34982 312 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 RAB27AP51159 221 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 ATXN3P54252 364 aaPredicted RBP4.15□□□□□ -1.75
HERC1-211ENST00000560983 SEMG2Q02383 582 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 GFPT1Q06210 699 aaPredicted RBP4.15□□□□□ -1.75
HERC1-211ENST00000560983 GRSF1Q12849 480 aaKnown RBP eCLIP4.15□□□□□ -1.75
HERC1-211ENST00000560983 SQSTM1Q13501 440 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 SPIDRQ14159 915 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 DMC1Q14565 340 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 ZNF460Q14592 562 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 PSMD5Q16401 504 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 DUOXA1Q1HG43 343 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 RABL3Q5HYI8 236 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 SPDYCQ5MJ68 293 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 FKBP15Q5T1M5 1219 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 FAM171A1Q5VUB5 890 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 TSHZ3Q63HK5 1081 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 LPCAT2Q7L5N7 544 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 TRMT1LQ7Z2T5 733 aaKnown RBP4.15□□□□□ -1.75
HERC1-211ENST00000560983 HOMER1Q86YM7 354 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 TBC1D10CQ8IV04 446 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 GALNT15Q8N3T1 639 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 ENAHQ8N8S7 591 aaPredicted RBP4.15□□□□□ -1.75
HERC1-211ENST00000560983 CEP76Q8TAP6 659 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 RLN3Q8WXF3 142 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 FRAT1Q92837 279 aaPredicted RBP4.15□□□□□ -1.75
HERC1-211ENST00000560983 MAP7D2Q96T17 732 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 MXRA8Q9BRK3 442 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 FDXACB1Q9BRP7 624 aaPredicted RBP4.15□□□□□ -1.75
HERC1-211ENST00000560983 SOX7Q9BT81 388 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 TTPALQ9BTX7 342 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 GPR87Q9BY21 358 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 GCOM2Q9BZD3 368 aaPredicted RBP4.15□□□□□ -1.75
HERC1-211ENST00000560983 TPSD1Q9BZJ3 242 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 LRRCC1Q9C099 1032 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 KAT14Q9H8E8 782 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 LY9Q9HBG7 655 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 AGO4Q9HCK5 861 aaKnown RBP4.15□□□□□ -1.75
HERC1-211ENST00000560983 ZNF302Q9NR11 478 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 ECHDC1Q9NTX5 307 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 CACNG4Q9UBN1 327 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 ADAM28Q9UKQ2 775 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 MAN2B2Q9Y2E5 1009 aa4.15□□□□□ -1.75
HERC1-211ENST00000560983 ATXN2Q99700 1313 aaKnown RBP4.15□□□□□ -1.75
HERC1-211ENST00000560983 CNTNAP2Q9UHC6 1331 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms