RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 TRDMT1O14717 391 aaKnown RBP13.22□□□□□ -0.29
SNX1-211ENST00000560829 MATN3O15232 486 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 ZBTB24O43167 697 aaPredicted RBP13.22□□□□□ -0.29
SNX1-211ENST00000560829 AP2A1O95782 977 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 FGBP02675 491 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 STX2P32856 288 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 LSP1P33241 339 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 GRIA1P42261 906 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 C5orf22Q49AR2 442 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 KCTD11Q693B1 232 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 ADGRD1Q6QNK2 874 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 CYS1Q717R9 158 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 CLP1Q92989 425 aaKnown RBP13.22□□□□□ -0.29
SNX1-211ENST00000560829 ZNF512Q96ME7 567 aaPredicted RBP13.22□□□□□ -0.29
SNX1-211ENST00000560829 XPO6Q96QU8 1125 aaKnown RBP13.22□□□□□ -0.29
SNX1-211ENST00000560829 IL12RB2Q99665 862 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 ZBP1Q9H171 429 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 TRPM5Q9NZQ8 1165 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 MPP6Q9NZW5 540 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 ZNF212Q9UDV6 495 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 ZC3H7BQ9UGR2 993 aaKnown RBP13.22□□□□□ -0.29
SNX1-211ENST00000560829 SSX2IPQ9Y2D8 614 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 POC1B-GALNT4F8VUJ3 575 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 DFFAO00273 331 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 FGF18O76093 207 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 HSPA1AP0DMV8 641 aaKnown RBP13.21□□□□□ -0.29
SNX1-211ENST00000560829 HSPA1BP0DMV9 641 aaKnown RBP13.21□□□□□ -0.29
SNX1-211ENST00000560829 CTSAP10619 480 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 PRKCHP24723 683 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 VEPH1Q14D04 833 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 HECTD3Q5T447 861 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 TIGD7Q6NT04 549 aaPredicted RBP13.21□□□□□ -0.29
SNX1-211ENST00000560829 FBXL22Q6P050 247 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 CCNJLQ8IV13 435 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 FIBCD1Q8N539 461 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 CNTD1Q8N815 330 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 RETREG1Q9H6L5 497 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 NOL6Q9H6R4 1146 aaKnown RBP13.21□□□□□ -0.29
SNX1-211ENST00000560829 SENP1Q9P0U3 644 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 RSPH14Q9UHP6 348 aa13.21□□□□□ -0.29
SNX1-211ENST00000560829 MKI67P46013 3256 aaKnown RBP13.21□□□□□ -0.3
SNX1-211ENST00000560829 ZBBXA8MT70 800 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 TEX28O15482 410 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 CPP00450 1065 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 JCHAINP01591 159 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 CCNB1P14635 433 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 ELF1P32519 619 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 IFNAR2P48551 515 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 FPGSQ05932 587 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 DMTNQ08495 405 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 TMED2Q15363 201 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 RAP1GAP2Q684P5 730 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 STEAP4Q687X5 459 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 TTC19Q6DKK2 380 aaPredicted RBP13.21□□□□□ -0.3
SNX1-211ENST00000560829 NADSYN1Q6IA69 706 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 ARHGAP36Q6ZRI8 547 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 TRABD2AQ86V40 505 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 AZIN2Q96A70 460 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 AGAP3Q96P47 875 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 PAFAH2Q99487 392 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 NAT9Q9BTE0 207 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 TBK1Q9UHD2 729 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 TTLL3Q9Y4R7 772 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 INSL6Q9Y581 213 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 INSL5Q9Y5Q6 135 aa13.21□□□□□ -0.3
SNX1-211ENST00000560829 ARHGAP42A6NI28 874 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 SDR42E2A6NKP2 422 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 COCHO43405 550 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 OAS1P00973 400 aaKnown RBP13.2□□□□□ -0.3
SNX1-211ENST00000560829 HMBSP08397 361 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 CHN1P15882 459 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 NFKB1P19838 968 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 PAPOLAP51003 745 aaKnown RBP13.2□□□□□ -0.3
SNX1-211ENST00000560829 ALFQ53S48 1182 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 LEKR1Q6ZMV7 388 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 UNC5AQ6ZN44 842 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 ZNF771Q7L3S4 317 aaPredicted RBP13.2□□□□□ -0.3
SNX1-211ENST00000560829 MPP5Q8N3R9 675 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 GSDMBQ8TAX9 411 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
SNX1-211ENST00000560829 DCAKDQ8WVC6 231 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 SLC44A1Q8WWI5 657 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 AUTS2Q8WXX7 1259 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 IGSF8Q969P0 613 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 PSMG2Q969U7 264 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 PLD4Q96BZ4 506 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 SELENOSQ9BQE4 189 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 MLPHQ9BV36 600 aaPredicted RBP13.2□□□□□ -0.3
SNX1-211ENST00000560829 UXTQ9UBK9 157 aaPredicted RBP13.2□□□□□ -0.3
SNX1-211ENST00000560829 PRKAG2Q9UGJ0 569 aa13.2□□□□□ -0.3
SNX1-211ENST00000560829 RASA4BC9J798 803 aa13.19□□□□□ -0.3
SNX1-211ENST00000560829 F5H423 210 aaPredicted RBP13.19□□□□□ -0.3
SNX1-211ENST00000560829 PRRG1O14668 218 aa13.19□□□□□ -0.3
SNX1-211ENST00000560829 PSMD3O43242 534 aa13.19□□□□□ -0.3
SNX1-211ENST00000560829 RASA4O43374 803 aa13.19□□□□□ -0.3
SNX1-211ENST00000560829 ACSL4O60488 711 aa13.19□□□□□ -0.3
SNX1-211ENST00000560829 CNTN5O94779 1100 aa13.19□□□□□ -0.3
SNX1-211ENST00000560829 TACR2P21452 398 aa13.19□□□□□ -0.3
SNX1-211ENST00000560829 DNAJB2P25686 324 aa13.19□□□□□ -0.3
SNX1-211ENST00000560829 MSH2P43246 934 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms