RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 TPH1P17752 444 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 ITGAXP20702 1163 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 ADRA1DP25100 572 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 HPCAL1P37235 193 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 KLHL12Q53G59 568 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 CYP2R1Q6VVX0 501 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 CACTIN-AS1Q8N1I8 211 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 NOL6Q9H6R4 1146 aaKnown RBP13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 ATP13A1Q9HD20 1204 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 RPL26L1Q9UNX3 145 aaKnown RBP13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 ASTN2O75129 1339 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 PIGNO95427 931 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 HUNKP57058 714 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 FGD3Q5JSP0 725 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 KCNT2Q6UVM3 1135 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 CREG2Q8IUH2 290 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 BRSK2Q8IWQ3 736 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 TMEM237Q96Q45 408 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 CIPCQ9C0C6 399 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 DNAJC18Q9H819 358 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 TMCO1Q9UM00 188 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 CHKBQ9Y259 395 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 PCDHGC5Q9Y5F6 944 aa13.44□□□□□ -0.26
CSPG4P11-201ENST00000560634 TUBP50607 506 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 SLC6A3Q01959 620 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 DPYSL3Q14195 570 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 PLCL1Q15111 1095 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 MAPK11Q15759 364 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 MZT2BQ6NZ67 158 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 CELF6Q96J87 481 aaKnown RBP13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 OSGEPL1Q9H4B0 414 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 ARMCX1Q9P291 453 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 PRKAG3Q9UGI9 489 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 DNPEPQ9ULA0 475 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 INVSQ9Y283 1065 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 ZSCAN5CA6NGD5 496 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 SNX3O60493 162 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 ALDH2P05091 517 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 FAM153BP0C7A2 387 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 AMPD1P23109 780 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 FAM153CQ494X1 144 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 LRRC38Q5VT99 294 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 TRMT11Q7Z4G4 463 aaKnown RBP13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 LENG9Q96B70 501 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 SMARCD1Q96GM5 515 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 APBA2Q99767 749 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 OPTCQ9UBM4 332 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 LRRC10BA6NIK2 292 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 DCDC2CA8MYV0 355 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 H3BRB1 525 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 CYP7B1O75881 506 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 EPN2O95208 641 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 VTNP04004 478 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 OR1E1P30953 314 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 CYP2C18P33260 490 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 RNF148Q8N7C7 305 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 SERAC1Q96JX3 654 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 BBS4Q96RK4 519 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 TBL1YQ9BQ87 522 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 TUT1Q9H6E5 874 aaKnown RBP13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 CRNNQ9UBG3 495 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 ACKR2O00590 384 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 ZBTB14O43829 449 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 TNFRSF8P28908 595 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 AXLP30530 894 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 LRPAP1P30533 357 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 ELF3P78545 371 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 ST3GAL1Q11201 340 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 NEPROQ6NW34 567 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 NET1Q7Z628 596 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 UXS1Q8NBZ7 420 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 TPD52L3Q96J77 140 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 HGH1Q9BTY7 390 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 NLNQ9BYT8 704 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 IL22Q9GZX6 179 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 ATP6V1HQ9UI12 483 aa13.43□□□□□ -0.26
CSPG4P11-201ENST00000560634 MIPP30301 263 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 PRKCIP41743 596 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 SPIRE1Q08AE8 756 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 CYP2A13Q16696 494 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 PAGE2BQ5JRK9 111 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 PRAMEF18Q5VWM3 479 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 MZT2AQ6P582 158 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 ZNF621Q6ZSS3 439 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 LINC00116Q8NCU8 138 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 STAG3L4Q8TBR4 150 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 ASZ1Q8WWH4 475 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 PTCD3Q96EY7 689 aaKnown RBP13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 KLHL1Q9NR64 748 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 ADAM28Q9UKQ2 775 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 GLI2P10070 1586 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 CHADO15335 359 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 YBX3P16989 372 aaKnown RBP eCLIP13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 ADIGQ0VDE8 80 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 TMEM119Q4V9L6 283 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 CDH24Q86UP0 819 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 ZNF557Q8N988 423 aaPredicted RBP13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 ARRDC4Q8NCT1 418 aa13.42□□□□□ -0.26
CSPG4P11-201ENST00000560634 ZSWIM2Q8NEG5 633 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms