RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TARSL2A2RTX5 802 aaKnown RBP10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 CETN3O15182 167 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 FFAR2O15552 330 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 BNIP3LO60238 219 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 LUC7L3O95232 432 aaKnown RBP10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 APOEP02649 317 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 MYL1P05976 194 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 SRPRAP08240 638 aaKnown RBP10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 ZNF18P17022 549 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 C5AR1P21730 350 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 SYKP43405 635 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 STK19P49842 368 aaPredicted RBP10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 PPP2CBP62714 309 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 PPP2CAP67775 309 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 ILKQ13418 452 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 STAT4Q14765 748 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 NFIL3Q16649 462 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 ACCSLQ4AC99 568 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 FAM133BQ5BKY9 247 aaKnown RBP10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 C9orf64Q5T6V5 341 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 NADSYN1Q6IA69 706 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 MSANTD2Q6P1R3 559 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 TMC6Q7Z403 805 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 CHSY1Q86X52 802 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 SPACA3Q8IXA5 215 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 LGI2Q8N0V4 545 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 AADATQ8N5Z0 425 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 TTC17Q96AE7 1141 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 MYO19Q96H55 970 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 FAXDC2Q96IV6 333 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 SERPINB11Q96P15 392 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 NUCKS1Q9H1E3 243 aaKnown RBP10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 ST7Q9NRC1 585 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 TJP2Q9UDY2 1190 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 ADAMTS1Q9UHI8 967 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 INTS6Q9UL03 887 aaKnown RBP10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 FLNBO75369 2602 aaKnown RBP10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 J3QKU1 62 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 RHOBTB3O94955 611 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 MZF1P28698 734 aaPredicted RBP10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 PCBP4P57723 403 aaKnown RBP10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 INSM1Q01101 510 aaPredicted RBP10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 TLE3Q04726 772 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 ENPEPQ07075 957 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 KCNH2Q12809 1159 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 TBC1D25Q3MII6 688 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 DCAF6Q58WW2 860 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 FSCBQ5H9T9 825 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 ARHGAP40Q5TG30 622 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 RAP1GAP2Q684P5 730 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 ATL3Q6DD88 541 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 TMEM270Q6UE05 265 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 DSG4Q86SJ6 1040 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 APCDD1Q8J025 514 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 GUF1Q8N442 669 aaKnown RBP10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 MFSD2AQ8NA29 543 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 LSM14AQ8ND56 463 aaKnown RBP10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 ZNF248Q8NDW4 579 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 CLEC4CQ8WTT0 213 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 KCTD13Q8WZ19 329 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 IRGQQ8WZA9 623 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 TSC1Q92574 1164 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 MRGPRX3Q96LB0 322 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 SPATA32Q96LK8 384 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 TSG101Q99816 390 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 IRX2Q9BZI1 471 aaPredicted RBP10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 SLCO3A1Q9UIG8 710 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 TPX2Q9ULW0 747 aaKnown RBP10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 PCDHB4Q9Y5E5 795 aa10.84□□□□□ -0.67
CDC42BPB-207ENST00000560492 CAPN8A6NHC0 703 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 O00370 1275 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 SIGLEC6O43699 453 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 RTN2O75298 545 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 MT-CO3P00414 261 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 IGLV3-27P01718 113 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 MPOP05164 745 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 VAV1P15498 845 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 PDGFRAP16234 1089 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 TBXAS1P24557 533 aaPredicted RBP10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 BRD2P25440 801 aaKnown RBP10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 TMPRSS3P57727 454 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 GABREP78334 506 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 E2F1Q01094 437 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 ELAVL3Q14576 367 aaKnown RBP10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 CBWD6Q4V339 395 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 SETMARQ53H47 684 aaPredicted RBP10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 MS4A13Q5J8X5 152 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 CBWD3Q5JTY5 395 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 CBWD5Q5RIA9 395 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 SPATS2Q86XZ4 545 aaKnown RBP10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 HSCBQ8IWL3 235 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 SMYD4Q8IYR2 804 aaPredicted RBP10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 KDM1BQ8NB78 822 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 DQX1Q8TE96 717 aaKnown RBP10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 OR8D1Q8WZ84 308 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 KLK6Q92876 244 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 RNF34Q969K3 372 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 MYEOVQ96EZ4 313 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 KLHDC7BQ96G42 594 aa10.83□□□□□ -0.68
CDC42BPB-207ENST00000560492 FAM129BQ96TA1 746 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms