RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 KIAA1614Q5VZ46 1190 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 NUGGCQ68CJ6 796 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 MSANTD2Q6P1R3 559 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 FAM186BQ8IYM0 893 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 APCDD1Q8J025 514 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 CFAP52Q8N1V2 620 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 TTC39CQ8N584 583 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 OR4C6Q8NH72 309 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 MED8Q96G25 268 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 VCPIP1Q96JH7 1222 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 ZNF396Q96N95 335 aaPredicted RBP17.18■□□□□ 0.34
HERC1-207ENST00000560316 DEPDC7Q96QD5 511 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 IRX2Q9BZI1 471 aaPredicted RBP17.18■□□□□ 0.34
HERC1-207ENST00000560316 NUCKS1Q9H1E3 243 aaKnown RBP17.18■□□□□ 0.34
HERC1-207ENST00000560316 OSBPL2Q9H1P3 480 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 POLR1BQ9H9Y6 1135 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 ASCL3Q9NQ33 180 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 SERTAD1Q9UHV2 236 aa17.18■□□□□ 0.34
HERC1-207ENST00000560316 DOCK9Q9BZ29 2069 aa17.17■□□□□ 0.34
HERC1-207ENST00000560316 TYW5A2RUC4 315 aaKnown RBP17.17■□□□□ 0.34
HERC1-207ENST00000560316 PIK3R2O00459 728 aa17.17■□□□□ 0.34
HERC1-207ENST00000560316 OVGP1Q12889 678 aa17.17■□□□□ 0.34
HERC1-207ENST00000560316 HS1BP3Q53T59 392 aa17.17■□□□□ 0.34
HERC1-207ENST00000560316 RNF219Q5W0B1 726 aaPredicted RBP17.17■□□□□ 0.34
HERC1-207ENST00000560316 KRT39Q6A163 491 aa17.17■□□□□ 0.34
HERC1-207ENST00000560316 CEP57L1Q8IYX8 460 aa17.17■□□□□ 0.34
HERC1-207ENST00000560316 SNRNP27Q8WVK2 155 aaKnown RBP17.17■□□□□ 0.34
HERC1-207ENST00000560316 PAGE5Q96GU1 130 aa17.17■□□□□ 0.34
HERC1-207ENST00000560316 DPH1Q9BZG8 443 aa17.17■□□□□ 0.34
HERC1-207ENST00000560316 CNGB3Q9NQW8 809 aa17.17■□□□□ 0.34
HERC1-207ENST00000560316 FAM13BQ9NYF5 915 aa17.17■□□□□ 0.34
HERC1-207ENST00000560316 HESX1Q9UBX0 185 aa17.17■□□□□ 0.34
HERC1-207ENST00000560316 TRAF3IP3Q9Y228 551 aa17.17■□□□□ 0.34
HERC1-207ENST00000560316 NYNRINQ9P2P1 1898 aaKnown RBP17.16■□□□□ 0.34
HERC1-207ENST00000560316 PLRG1O43660 514 aaKnown RBP17.16■□□□□ 0.34
HERC1-207ENST00000560316 GABBR2O75899 941 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 LUC7L3O95232 432 aaKnown RBP17.16■□□□□ 0.34
HERC1-207ENST00000560316 MOCS3O95396 460 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 CKMT1AP12532 417 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 CD19P15391 556 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 RGS7P49802 495 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 ELAVL3Q14576 367 aaKnown RBP17.16■□□□□ 0.34
HERC1-207ENST00000560316 SGO2Q562F6 1265 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 DCAF6Q58WW2 860 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 MS4A13Q5J8X5 152 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 PRICKLE2Q7Z3G6 844 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 CCDC117Q8IWD4 279 aaPredicted RBP17.16■□□□□ 0.34
HERC1-207ENST00000560316 CLEC4CQ8WTT0 213 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 KCTD13Q8WZ19 329 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 AZIN2Q96A70 460 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 KLHDC7BQ96G42 594 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 MYOCQ99972 504 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 UPF2Q9HAU5 1272 aaKnown RBP17.16■□□□□ 0.34
HERC1-207ENST00000560316 THSD1Q9NS62 852 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 SARDHQ9UL12 918 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 DMTF1Q9Y222 760 aa17.16■□□□□ 0.34
HERC1-207ENST00000560316 GIMD1P0DJR0 217 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 FOXD4L6Q3SYB3 417 aaPredicted RBP17.15■□□□□ 0.34
HERC1-207ENST00000560316 ERICH6BQ5W0A0 696 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 RESP18Q5W5W9 173 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 FOXD4L3Q6VB84 417 aaPredicted RBP17.15■□□□□ 0.34
HERC1-207ENST00000560316 TRIM69Q86WT6 500 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 SCML4Q8N228 414 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 FBXL13Q8NEE6 735 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 FAM131CQ96AQ9 280 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 FAXDC2Q96IV6 333 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 FCRL2Q96LA5 508 aaPredicted RBP17.15■□□□□ 0.34
HERC1-207ENST00000560316 APOLD1Q96LR9 279 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 DDX50Q9BQ39 737 aaKnown RBP17.15■□□□□ 0.34
HERC1-207ENST00000560316 KDM4CQ9H3R0 1056 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 RAB20Q9NX57 234 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 PCDHA7Q9UN72 937 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 SATB2Q9UPW6 733 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 SSUH2Q9Y2M2 353 aa17.15■□□□□ 0.34
HERC1-207ENST00000560316 PRAMEF26H0Y7S4 382 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 K7ENP7 123 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 ACTN4O43707 911 aaKnown RBP17.14■□□□□ 0.33
HERC1-207ENST00000560316 MOCS2O96007 188 aaPredicted RBP17.14■□□□□ 0.33
HERC1-207ENST00000560316 THEGLP0DJG4 465 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 PSMC2P35998 433 aaKnown RBP17.14■□□□□ 0.33
HERC1-207ENST00000560316 NUDT1P36639 197 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 ME1P48163 572 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 MXI1P50539 228 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 KCNMA1Q12791 1236 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 CNTN1Q12860 1018 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 SETMARQ53H47 684 aaPredicted RBP17.14■□□□□ 0.33
HERC1-207ENST00000560316 C3orf38Q5JPI3 329 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 FOXD4L5Q5VV16 416 aaPredicted RBP17.14■□□□□ 0.33
HERC1-207ENST00000560316 INO80CQ6PI98 192 aaPredicted RBP17.14■□□□□ 0.33
HERC1-207ENST00000560316 FOXD4L4Q8WXT5 416 aaPredicted RBP17.14■□□□□ 0.33
HERC1-207ENST00000560316 KLK6Q92876 244 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 EEF2KMTQ96G04 330 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 SPAG5Q96R06 1193 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 TRIM4Q9C037 500 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 ABCG4Q9H172 646 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 KLHL11Q9NVR0 708 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 XPO7Q9UIA9 1087 aaKnown RBP17.14■□□□□ 0.33
HERC1-207ENST00000560316 MAPK8IP1Q9UQF2 711 aa17.14■□□□□ 0.33
HERC1-207ENST00000560316 TDRD6O60522 2096 aaKnown RBP17.14■□□□□ 0.33
HERC1-207ENST00000560316 LY6G6EA0A0G2JKS1 128 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms