RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TTLL5Q6EMB2 1281 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 ADHFE1Q8IWW8 467 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 B4GALNT2Q8NHY0 566 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 TMEM174Q8WUU8 243 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 SNRNP27Q8WVK2 155 aaKnown RBP4.16□□□□□ -1.74
SPG11-218ENST00000559754 CAMK1GQ96NX5 476 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 ZNF347Q96SE7 839 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 ZPBPQ9BS86 351 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 SF3B5Q9BWJ5 86 aaKnown RBP4.16□□□□□ -1.74
SPG11-218ENST00000559754 RBM38Q9H0Z9 239 aaKnown RBP4.16□□□□□ -1.74
SPG11-218ENST00000559754 AAMDCQ9H7C9 122 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 CERS4Q9HA82 394 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 FSCN3Q9NQT6 498 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 SAGE1Q9NXZ1 904 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 FBXO2Q9UK22 296 aaPredicted RBP4.16□□□□□ -1.74
SPG11-218ENST00000559754 LRP12Q9Y561 859 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 PCDHGB3Q9Y5G1 929 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 GAGE12JA6NER3 117 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 EPB41L2O43491 1005 aaKnown RBP4.15□□□□□ -1.75
SPG11-218ENST00000559754 IFNA2P01563 188 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 WNT1P04628 370 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 ALDH18A1P54886 795 aaKnown RBP4.15□□□□□ -1.75
SPG11-218ENST00000559754 KIAA1755Q5JYT7 1200 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 UBAP2Q5T6F2 1119 aaKnown RBP4.15□□□□□ -1.75
SPG11-218ENST00000559754 ANKRD40Q6AI12 368 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 TRABD2AQ86V40 505 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 NRSN1Q8IZ57 195 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 PDILTQ8N807 584 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 ASB5Q8WWX0 329 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 EME1Q96AY2 570 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 GCC1Q96CN9 775 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 REXO5Q96IC2 774 aaKnown RBP4.15□□□□□ -1.75
SPG11-218ENST00000559754 NEUROD6Q96NK8 337 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 MYLK2Q9H1R3 596 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 TNFSF13BQ9Y275 285 aa4.15□□□□□ -1.75
SPG11-218ENST00000559754 LOC105369274A0A096LPK9 316 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 LOC102723532A0A0G2JNH3 316 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 RPS10-NUDT3A0A1W2PQS6 291 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 A6NNC1 897 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 FOXO6A8MYZ6 492 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 PCDH17O14917 1159 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 MDM4O15151 490 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 PLA2G6O60733 806 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 RNASEH2AO75792 299 aaKnown RBP4.14□□□□□ -1.75
SPG11-218ENST00000559754 KAT7O95251 611 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 CER1O95813 267 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 LCKP06239 509 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 HOXB2P14652 356 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 NPPBP16860 134 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 IGFBP2P18065 325 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 CHKAP35790 457 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 PPM1AP35813 382 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 HSPA7P48741 367 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 ZXDBP98169 803 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 PPFIA1Q13136 1202 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 GRM4Q14833 912 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 MPEG1Q2M385 716 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 C10orf76Q5T2E6 689 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 NUGGCQ68CJ6 796 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 OR4N4Q8N0Y3 316 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 FBXL14Q8N1E6 418 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 GPATCH11Q8N954 259 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 CCDC89Q8N998 374 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 NAXEQ8NCW5 288 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 PPM1MQ96MI6 270 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 NTPCRQ9BSD7 190 aaKnown RBP4.14□□□□□ -1.75
SPG11-218ENST00000559754 STK33Q9BYT3 514 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 EPS8L2Q9H6S3 715 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 SELENONQ9NZV5 590 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 SLC39A10Q9ULF5 831 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 GPR52Q9Y2T5 361 aa4.14□□□□□ -1.75
SPG11-218ENST00000559754 LRRFIP2Q9Y608 721 aaKnown RBP4.14□□□□□ -1.75
SPG11-218ENST00000559754 LMTK3Q96Q04 1460 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 A0A1B0GVC2 190 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 EME2A4GXA9 379 aaPredicted RBP4.13□□□□□ -1.75
SPG11-218ENST00000559754 PRR23D1E9PI22 279 aaPredicted RBP4.13□□□□□ -1.75
SPG11-218ENST00000559754 H0YGN5 161 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 MSI1O43347 362 aaKnown RBP4.13□□□□□ -1.75
SPG11-218ENST00000559754 AGR2O95994 175 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 KLKB1P03952 638 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 CYP3A4P08684 503 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 ALDOCP09972 364 aaKnown RBP4.13□□□□□ -1.75
SPG11-218ENST00000559754 PRR23D2P0DMB1 279 aaPredicted RBP4.13□□□□□ -1.75
SPG11-218ENST00000559754 GRK5P34947 590 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 MAPK9P45984 424 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 EIF5P55010 431 aaKnown RBP4.13□□□□□ -1.75
SPG11-218ENST00000559754 TAS2R50P59544 299 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 RPL15P61313 204 aaKnown RBP4.13□□□□□ -1.75
SPG11-218ENST00000559754 GALNT3Q14435 633 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 ZNF569Q5MCW4 686 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 RINT1Q6NUQ1 792 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 PARM1Q6UWI2 310 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 ANKRD18AQ8IVF6 992 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 ADGRF3Q8IZF5 1079 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 FAM9BQ8IZU0 186 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 SMRP1Q8NCR6 262 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 MEIS3Q99687 375 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 ARHGAP39Q9C0H5 1083 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 SPAG4Q9NPE6 437 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms