RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 DLGAP2Q9P1A6 1054 aa22.28■■□□□ 1.16
SNX1-206ENST00000559389 INTS6Q9UL03 887 aaKnown RBP22.28■■□□□ 1.16
SNX1-206ENST00000559389 KMT2EQ8IZD2 1858 aa22.28■■□□□ 1.16
SNX1-206ENST00000559389 PRR33A8MZF0 331 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 PI15O43692 258 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 RNF40O75150 1001 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 PALMO75781 387 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 KRT1P04264 644 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 DCNP07585 359 aaKnown RBP22.27■■□□□ 1.16
SNX1-206ENST00000559389 MZF1P28698 734 aaPredicted RBP22.27■■□□□ 1.16
SNX1-206ENST00000559389 MAGEA9P43362 315 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 KIR2DL1P43626 348 aaPredicted RBP22.27■■□□□ 1.16
SNX1-206ENST00000559389 DPYSL3Q14195 570 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 PDK2Q15119 407 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 PLEKHG6Q3KR16 790 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 PITRM1Q5JRX3 1037 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 ZNF783Q6ZMS7 281 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 SYCE1Q8N0S2 351 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 ALG14Q96F25 216 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 ZNF670Q9BS34 389 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 C1QTNF1Q9BXJ1 281 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 NDFIP2Q9NV92 336 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 STARD13Q9Y3M8 1113 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 OR51B4Q9Y5P0 310 aa22.27■■□□□ 1.16
SNX1-206ENST00000559389 ILVBLA1L0T0 632 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 ANTXRLA6NF34 631 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 CD48P09326 243 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 ERCC2P18074 760 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 CTNNA1P35221 906 aaKnown RBP22.26■■□□□ 1.15
SNX1-206ENST00000559389 MARCKSL1P49006 195 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 PLK1P53350 603 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 SEC13P55735 322 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 MBLAC2Q68D91 279 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 NT5DC3Q86UY8 548 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 APCDD1Q8J025 514 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 TMEM105Q8N8V8 129 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 CCDC26Q8TAB7 109 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 USP33Q8TEY7 942 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 RAPGEF5Q92565 580 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 IER2Q9BTL4 223 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 CIPCQ9C0C6 399 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 ELOVL2Q9NXB9 296 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 DDX56Q9NY93 547 aaKnown RBP22.26■■□□□ 1.15
SNX1-206ENST00000559389 HCN2Q9UL51 889 aa22.26■■□□□ 1.15
SNX1-206ENST00000559389 LRRD1A4D1F6 860 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 TNNT1P13805 278 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 IL4RP24394 825 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 CTNNA2P26232 953 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 MRPS21P82921 87 aaKnown RBP22.25■■□□□ 1.15
SNX1-206ENST00000559389 GNA12Q03113 381 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 GAS6Q14393 721 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 TMEM31Q5JXX7 168 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 ZFYVE27Q5T4F4 411 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 RNF219Q5W0B1 726 aaPredicted RBP22.25■■□□□ 1.15
SNX1-206ENST00000559389 EGFLAMQ63HQ2 1017 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 VSIG1Q86XK7 387 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 KCTD6Q8NC69 237 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 KRT35Q92764 455 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 FAF2Q96CS3 445 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 FEM1AQ9BSK4 669 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 CALN1Q9BXU9 219 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 DNAI1Q9UI46 699 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 PYCARDQ9ULZ3 195 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 CHD5Q8TDI0 1954 aa22.25■■□□□ 1.15
SNX1-206ENST00000559389 MUC3AQ02505 3323 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 C3orf70A6NLC5 250 aaPredicted RBP22.24■■□□□ 1.15
SNX1-206ENST00000559389 ZNF487B1APH4 448 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 DCLK1O15075 740 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 DAPK3O43293 454 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 ZSCAN12O43309 604 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 TIMM44O43615 452 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 KDELR1P24390 212 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 MMRN1Q13201 1228 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 PKN3Q6P5Z2 889 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 PEX26Q7Z412 305 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 MAP7D3Q8IWC1 876 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 KATNAL2Q8IYT4 538 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 UMODL1-AS1Q8N2C9 162 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 NPWQ8N729 165 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 ZNF513Q8N8E2 541 aaPredicted RBP22.24■■□□□ 1.15
SNX1-206ENST00000559389 DCAF4L2Q8NA75 395 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 RPLP0P6Q8NHW5 317 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 KCNV2Q8TDN2 545 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 UCMAQ8WVF2 138 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 TTC17Q96AE7 1141 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 PSMB7Q99436 277 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 MUC3BQ9H195 1237 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 NOL6Q9H6R4 1146 aaKnown RBP22.24■■□□□ 1.15
SNX1-206ENST00000559389 DONSONQ9NYP3 566 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 VPS28Q9UK41 221 aa22.24■■□□□ 1.15
SNX1-206ENST00000559389 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.24■■□□□ 1.15
SNX1-206ENST00000559389 A0A0D9SEW6 157 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 CCDC66A2RUB6 948 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 CHURC1-FNTBB4DL54 471 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 RAMP2O60895 175 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 FTCDO95954 541 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 ASLP04424 464 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 HNRNPLP14866 589 aaKnown RBP eCLIP22.23■■□□□ 1.15
SNX1-206ENST00000559389 POLR2EP19388 210 aaKnown RBP22.23■■□□□ 1.15
SNX1-206ENST00000559389 ETFBP38117 255 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms