RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 C10orf120Q5SQS8 335 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 C19orf48Q6RUI8 117 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 ZNF662Q6ZS27 426 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 DEFB119Q8N690 84 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 OTUB2Q96DC9 234 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 PGAP3Q96FM1 320 aaPredicted RBP17.4■□□□□ 0.38
PSEN1-224ENST00000559361 MCEEQ96PE7 176 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 OSER1Q9NX31 292 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 SMPD4Q9NXE4 827 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 CFAP97Q9P2B7 532 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 TBC1D14Q9P2M4 693 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 STARD13Q9Y3M8 1113 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 HBS1LQ9Y450 684 aaKnown RBP17.4■□□□□ 0.38
PSEN1-224ENST00000559361 PAXBP1Q9Y5B6 917 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 ADGRG1Q9Y653 693 aa17.4■□□□□ 0.38
PSEN1-224ENST00000559361 A0A1W2PQF6 199 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 E2F8A0AVK6 867 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 C2CD4BA6NLJ0 364 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 SCAMP3O14828 347 aaKnown RBP17.39■□□□□ 0.37
PSEN1-224ENST00000559361 PJA2O43164 708 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 COCHO43405 550 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 SH3BP5O60239 455 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 F9P00740 461 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 FYNP06241 537 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 SYPP08247 313 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 PDGFRAP16234 1089 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 ZNF143P52747 638 aaPredicted RBP17.39■□□□□ 0.37
PSEN1-224ENST00000559361 HADHBP55084 474 aaKnown RBP17.39■□□□□ 0.37
PSEN1-224ENST00000559361 COG7P83436 770 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 GAD2Q05329 585 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 KDSRQ06136 332 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 KIF5AQ12840 1032 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 HS1BP3Q53T59 392 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 TRMT11Q7Z4G4 463 aaKnown RBP17.39■□□□□ 0.37
PSEN1-224ENST00000559361 DEFB106AQ8N104 65 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 ZNF513Q8N8E2 541 aaPredicted RBP17.39■□□□□ 0.37
PSEN1-224ENST00000559361 ZNF564Q8TBZ8 553 aaPredicted RBP17.39■□□□□ 0.37
PSEN1-224ENST00000559361 NDRG1Q92597 394 aaKnown RBP17.39■□□□□ 0.37
PSEN1-224ENST00000559361 NT5C3BQ969T7 300 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 ZNF419Q96HQ0 510 aaPredicted RBP17.39■□□□□ 0.37
PSEN1-224ENST00000559361 ZFRQ96KR1 1074 aaKnown RBP17.39■□□□□ 0.37
PSEN1-224ENST00000559361 CAMK1GQ96NX5 476 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 NUP85Q9BW27 656 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 PACSIN1Q9BY11 444 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 CCSER2Q9H7U1 834 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 CALCOCO1Q9P1Z2 691 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 CTTNBP2NLQ9P2B4 639 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 MYO1AQ9UBC5 1043 aa17.39■□□□□ 0.37
PSEN1-224ENST00000559361 ASH1LQ9NR48 2969 aaKnown RBP17.38■□□□□ 0.37
PSEN1-224ENST00000559361 TBC1D3BA6NDS4 549 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 TMEM191CA6NGB0 347 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 HOXC11O43248 304 aaPredicted RBP17.38■□□□□ 0.37
PSEN1-224ENST00000559361 GRAP2O75791 330 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 SLC2A3P11169 496 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 GPD1P21695 349 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 RFC1P35251 1148 aaPredicted RBP17.38■□□□□ 0.37
PSEN1-224ENST00000559361 FLT3P36888 993 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 PGFP49763 221 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 RNASE9P60153 205 aaKnown RBP17.38■□□□□ 0.37
PSEN1-224ENST00000559361 TAF5Q15542 800 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 IFI16Q16666 785 aaKnown RBP17.38■□□□□ 0.37
PSEN1-224ENST00000559361 COL28A1Q2UY09 1125 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 STRADAQ7RTN6 431 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 MIB1Q86YT6 1006 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 ACRBPQ8NEB7 543 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 DQX1Q8TE96 717 aaKnown RBP17.38■□□□□ 0.37
PSEN1-224ENST00000559361 EDEM1Q92611 657 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 NPY6RQ99463 290 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 CNPY3Q9BT09 278 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 KCNF1Q9H3M0 494 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 MARCH2Q9P0N8 246 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 IP6K2Q9UHH9 426 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 NAALADL1Q9UQQ1 740 aa17.38■□□□□ 0.37
PSEN1-224ENST00000559361 REXO2Q9Y3B8 237 aaKnown RBP17.38■□□□□ 0.37
PSEN1-224ENST00000559361 MYO1FO00160 1098 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 CCP110O43303 1012 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 ZSCAN12O43309 604 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 ATMINO43313 823 aaPredicted RBP17.37■□□□□ 0.37
PSEN1-224ENST00000559361 KRT86O43790 486 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 ZNF217O75362 1048 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 TULP3O75386 442 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 IGLV3-25P01717 112 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 FTH1P19P0C7X4 201 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 NTSR1P30989 418 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 ARHGAP25P42331 645 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 PIGHQ14442 188 aaPredicted RBP17.37■□□□□ 0.37
PSEN1-224ENST00000559361 PREPLQ4J6C6 727 aaPredicted RBP17.37■□□□□ 0.37
PSEN1-224ENST00000559361 ACBD5Q5T8D3 534 aaPredicted RBP17.37■□□□□ 0.37
PSEN1-224ENST00000559361 SND1Q7KZF4 910 aaKnown RBP eCLIP17.37■□□□□ 0.37
PSEN1-224ENST00000559361 GLRX5Q86SX6 157 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 NIPA2Q8N8Q9 360 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 TERB1Q8NA31 727 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 SLC35G2Q8TBE7 412 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 UBE2Q2Q8WVN8 375 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 RXFP2Q8WXD0 754 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 ARHGEF26Q96DR7 871 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 DESI2Q9BSY9 194 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 CCDC86Q9H6F5 360 aaKnown RBP17.37■□□□□ 0.37
PSEN1-224ENST00000559361 FAM204AQ9H8W3 233 aa17.37■□□□□ 0.37
PSEN1-224ENST00000559361 TLR6Q9Y2C9 796 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms