RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PDGFRLQ15198 375 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 OASLQ15646 514 aaKnown RBP18.55■□□□□ 0.56
CLPX-203ENST00000558958 LY6G5CQ5SRR4 150 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 TRIM68Q6AZZ1 485 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 SETD3Q86TU7 594 aaPredicted RBP18.55■□□□□ 0.56
CLPX-203ENST00000558958 ZC3H18Q86VM9 953 aaKnown RBP18.55■□□□□ 0.56
CLPX-203ENST00000558958 KLHL7Q8IXQ5 586 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 MMGT1Q8N4V1 131 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 CCDC33Q8N5R6 958 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 NOA1Q8NC60 698 aaKnown RBP18.55■□□□□ 0.56
CLPX-203ENST00000558958 DEPDC1BQ8WUY9 529 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 KRT12Q99456 494 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 SLC39A8Q9C0K1 460 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 PLK2Q9NYY3 685 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 MARK1Q9P0L2 795 aa18.55■□□□□ 0.56
CLPX-203ENST00000558958 DRG1Q9Y295 367 aaKnown RBP18.55■□□□□ 0.56
CLPX-203ENST00000558958 C2CD4DB7Z1M9 353 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 RAMP2O60895 175 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 MX2P20592 715 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 KCNJ1P48048 391 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 DHCR24Q15392 516 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 C6orf118Q5T5N4 469 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 CXorf57Q6NSI4 855 aaKnown RBP18.54■□□□□ 0.56
CLPX-203ENST00000558958 CCDC137Q6PK04 289 aaKnown RBP18.54■□□□□ 0.56
CLPX-203ENST00000558958 CARNMT1Q8N4J0 409 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 OR52K2Q8NGK3 314 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 ATP2A3Q93084 1043 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 ZFYVE19Q96K21 471 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 RPP25Q9BUL9 199 aaKnown RBP18.54■□□□□ 0.56
CLPX-203ENST00000558958 BBS2Q9BXC9 721 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 PCYOX1Q9UHG3 505 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 NUMBLQ9Y6R0 609 aa18.54■□□□□ 0.56
CLPX-203ENST00000558958 KIF26AQ9ULI4 1882 aaPredicted RBP18.53■□□□□ 0.56
CLPX-203ENST00000558958 ILVBLA1L0T0 632 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 HACD1B0YJ81 288 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 H0Y626 953 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 H7C0C1 242 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 PPP1R12AO14974 1030 aaPredicted RBP18.53■□□□□ 0.56
CLPX-203ENST00000558958 NFATC1O95644 943 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 CYP17A1P05093 508 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 ITGAVP06756 1048 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 ARSAP15289 507 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 GARSP41250 739 aaKnown RBP18.53■□□□□ 0.56
CLPX-203ENST00000558958 ATP5OP48047 213 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 YBEYP58557 167 aaPredicted RBP18.53■□□□□ 0.56
CLPX-203ENST00000558958 GRM2Q14416 872 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 POLD3Q15054 466 aaPredicted RBP18.53■□□□□ 0.56
CLPX-203ENST00000558958 PARP15Q460N3 678 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 FSCBQ5H9T9 825 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 PTCRAQ6ISU1 281 aaPredicted RBP18.53■□□□□ 0.56
CLPX-203ENST00000558958 MFN1Q8IWA4 741 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 YAF2Q8IY57 180 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 ATL2Q8NHH9 583 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 MAFAQ8NHW3 353 aaPredicted RBP18.53■□□□□ 0.56
CLPX-203ENST00000558958 HDAC11Q96DB2 347 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 RUNDC3BQ96NL0 473 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 BRD8Q9H0E9 1235 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 EBF3Q9H4W6 596 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 NUP205Q92621 2012 aa18.53■□□□□ 0.56
CLPX-203ENST00000558958 RASA4BC9J798 803 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 NEDD8-MDP1E9PL57 170 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 DFFAO00273 331 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 RASA4O43374 803 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 ADH1CP00326 375 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 RHOCP08134 193 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 TYRP14679 529 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 PAPOLAP51003 745 aaKnown RBP18.52■□□□□ 0.56
CLPX-203ENST00000558958 GNA12Q03113 381 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 CDH18Q13634 790 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 PRKD1Q15139 912 aaPredicted RBP18.52■□□□□ 0.56
CLPX-203ENST00000558958 ANO4Q32M45 955 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 PUS10Q3MIT2 529 aaKnown RBP18.52■□□□□ 0.56
CLPX-203ENST00000558958 SLC45A4Q5BKX6 768 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 DARS2Q6PI48 645 aaKnown RBP18.52■□□□□ 0.56
CLPX-203ENST00000558958 ZNF783Q6ZMS7 281 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 B4GALNT4Q76KP1 1039 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 LRRC49Q8IUZ0 686 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 CCDC105Q8IYK2 499 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 PLCD3Q8N3E9 789 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 FIBINQ8TAL6 211 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 WFDC5Q8TCV5 224 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 LRRN4Q8WUT4 740 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 TFB1MQ8WVM0 346 aaKnown RBP18.52■□□□□ 0.56
CLPX-203ENST00000558958 HMCESQ96FZ2 354 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 QKIQ96PU8 341 aaKnown RBP eCLIP18.52■□□□□ 0.56
CLPX-203ENST00000558958 LGMNQ99538 433 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 TMEM121Q9BTD3 319 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 MAGEH1Q9H213 219 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 C10orf88Q9H8K7 445 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 HPS4Q9NQG7 708 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 AMACRQ9UHK6 382 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 CLEC4EQ9ULY5 219 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 ZNF148Q9UQR1 794 aa18.52■□□□□ 0.56
CLPX-203ENST00000558958 A0A0D9SEW6 157 aa18.52■□□□□ 0.55
CLPX-203ENST00000558958 BCLAF3A2AJT9 711 aaKnown RBP18.52■□□□□ 0.55
CLPX-203ENST00000558958 ARHGAP42A6NI28 874 aa18.52■□□□□ 0.55
CLPX-203ENST00000558958 CHADO15335 359 aa18.52■□□□□ 0.55
CLPX-203ENST00000558958 HOXC11O43248 304 aaPredicted RBP18.52■□□□□ 0.55
CLPX-203ENST00000558958 ADH5P11766 374 aa18.52■□□□□ 0.55
CLPX-203ENST00000558958 LMNB2Q03252 620 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms