RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 ME1P48163 572 aa18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 RPS24P62847 133 aaKnown RBP18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 ENPEPQ07075 957 aa18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 SETMARQ53H47 684 aaPredicted RBP18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 OR4C6Q8NH72 309 aa18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 UBA3Q8TBC4 463 aa18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 CCDC47Q96A33 483 aaKnown RBP18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 MED8Q96G25 268 aa18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 LMLNQ96KR4 655 aa18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 RAB20Q9NX57 234 aa18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 CYTH4Q9UIA0 394 aa18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 SLCO3A1Q9UIG8 710 aa18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 ITIH6Q6UXX5 1313 aa18.43■□□□□ 0.54
TSPAN3-204ENST00000558394 C10orf142B7Z368 130 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 SLC7A4O43246 635 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 OPA1O60313 960 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 CSO75390 466 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 LUC7L3O95232 432 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 IGLV3-27P01718 113 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 SETSIPP0DME0 302 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 RBMS1P29558 406 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 DAOAP59103 153 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 NUCB2P80303 420 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 FAM46CQ5VWP2 391 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 MMS22LQ6ZRQ5 1243 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 PRICKLE2Q7Z3G6 844 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 FBXL13Q8NEE6 735 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 KCTD13Q8WZ19 329 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 TTC9Q92623 222 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 PTPRN2Q92932 1015 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 CCDC97Q96F63 343 aaPredicted RBP18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 VCPIP1Q96JH7 1222 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 RPL10LQ96L21 214 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 PRICKLE1Q96MT3 831 aaPredicted RBP18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 ARHGAP20Q9P2F6 1191 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 SERTAD1Q9UHV2 236 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 DOCK9Q9BZ29 2069 aa18.42■□□□□ 0.54
TSPAN3-204ENST00000558394 SPTA1P02549 2419 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 STX10O60499 249 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 DGKAP23743 735 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 MXI1P50539 228 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 DUSP3P51452 185 aaPredicted RBP18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 YWHAEP62258 255 aaKnown RBP18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 POM121L1PQ3SYA9 428 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 FSCBQ5H9T9 825 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 CDCP2Q5VXM1 449 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 NADSYN1Q6IA69 706 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 CFAP52Q8N1V2 620 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 SCML4Q8N228 414 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 SLC25A45Q8N413 288 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 IRGQQ8WZA9 623 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 SEMA4DQ92854 862 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 PAGE5Q96GU1 130 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 INTS4Q96HW7 963 aaKnown RBP18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 SPAG5Q96R06 1193 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 OSBPL2Q9H1P3 480 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 HEMK1Q9Y5R4 338 aaPredicted RBP18.41■□□□□ 0.54
TSPAN3-204ENST00000558394 A0A1B0GVM2 712 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 PLRG1O43660 514 aaKnown RBP18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 RNGTTO60942 597 aaKnown RBP18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 RTN2O75298 545 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 GP1BAP07359 652 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 THEGLP0DJG4 465 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 CKMT1AP12532 417 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 DRD3P35462 400 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 ADAM9Q13443 819 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 NFIL3Q16649 462 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 MS4A13Q5J8X5 152 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 RESP18Q5W5W9 173 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 TRIM69Q86WT6 500 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 OR8D1Q8WZ84 308 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 NUCKS1Q9H1E3 243 aaKnown RBP18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 KLHL11Q9NVR0 708 aa18.4■□□□□ 0.54
TSPAN3-204ENST00000558394 HECTD1Q9ULT8 2610 aa18.39■□□□□ 0.54
TSPAN3-204ENST00000558394 NEMP2A6NFY4 417 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 C1QTNF3-AMACRE9PGA6 284 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 MOCS2O96007 188 aaPredicted RBP18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 LTFP02788 710 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 VDRP11473 427 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 ZNF18P17022 549 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 RGS7P49802 495 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 STK19P49842 368 aaPredicted RBP18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 SULT2A1Q06520 285 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 DCAF6Q58WW2 860 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 C3orf38Q5JPI3 329 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 MAPK15Q8TD08 544 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 SNRNP27Q8WVK2 155 aaKnown RBP18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 SERPINB11Q96P15 392 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 FAM117AQ9C073 453 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 UCKL1Q9NWZ5 548 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 TJP2Q9UDY2 1190 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 PCDHA7Q9UN72 937 aa18.39■□□□□ 0.53
TSPAN3-204ENST00000558394 PIK3R2O00459 728 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 MYL1P05976 194 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 CSRP3P50461 194 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 KCNMA1Q12791 1236 aa18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 FOXD4L6Q3SYB3 417 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-204ENST00000558394 ACCSLQ4AC99 568 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms