RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 H0Y626 953 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 H3BQ06 376 aaPredicted RBP17.3■□□□□ 0.36
SNX1-203ENST00000558040 SGK1O00141 431 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 DFFAO00273 331 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 MTSS1O43312 755 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 RAD51CO43502 376 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 LUC7L3O95232 432 aaKnown RBP17.3■□□□□ 0.36
SNX1-203ENST00000558040 LAMP2P13473 410 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 KCNA5P22460 613 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 FCARP24071 287 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 ETFBP38117 255 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 GARSP41250 739 aaKnown RBP17.3■□□□□ 0.36
SNX1-203ENST00000558040 SGSHP51688 502 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 OXCT1P55809 520 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 ZNF33AQ06730 810 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 CDH18Q13634 790 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 PPP1R7Q15435 360 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 HEATR6Q6AI08 1181 aaKnown RBP17.3■□□□□ 0.36
SNX1-203ENST00000558040 ZNF783Q6ZMS7 281 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 TPGS1Q6ZTW0 290 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 MTSS1LQ765P7 747 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 JAMLQ86YT9 394 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 ARHGAP12Q8IWW6 846 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 ALLCQ8N6M5 410 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 ZNF557Q8N988 423 aaPredicted RBP17.3■□□□□ 0.36
SNX1-203ENST00000558040 CCDC89Q8N998 374 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 CCNYQ8ND76 341 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 CCHCR1Q8TD31 782 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 GUCD1Q96NT3 240 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 TMEM121Q9BTD3 319 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 RAB17Q9H0T7 212 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 MAGEH1Q9H213 219 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 SPHK2Q9NRA0 654 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 NDFIP2Q9NV92 336 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 DUS2Q9NX74 493 aaKnown RBP17.3■□□□□ 0.36
SNX1-203ENST00000558040 WNT6Q9Y6F9 365 aa17.3■□□□□ 0.36
SNX1-203ENST00000558040 ILVBLA1L0T0 632 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 RASA4BC9J798 803 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 TTI1O43156 1089 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 RASA4O43374 803 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 STK10O94804 968 aaKnown RBP17.29■□□□□ 0.36
SNX1-203ENST00000558040 RHOCP08134 193 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 RHOXF2BP0C7M4 288 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 PTGIRP43119 386 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 PPIDQ08752 370 aaKnown RBP17.29■□□□□ 0.36
SNX1-203ENST00000558040 AP1B1Q10567 949 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 POLD3Q15054 466 aaPredicted RBP17.29■□□□□ 0.36
SNX1-203ENST00000558040 PRKD1Q15139 912 aaPredicted RBP17.29■□□□□ 0.36
SNX1-203ENST00000558040 PDGFRLQ15198 375 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 TIGD7Q6NT04 549 aaPredicted RBP17.29■□□□□ 0.36
SNX1-203ENST00000558040 MFN1Q8IWA4 741 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 YAF2Q8IY57 180 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 CARNMT1Q8N4J0 409 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 IRF7Q92985 503 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 HLA-CQ95604 372 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 ELSPBP1Q96BH3 223 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 RSPRY1Q96DX4 576 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 RHOXF2Q9BQY4 288 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 SLC39A8Q9C0K1 460 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 EPS15L1Q9UBC2 864 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 TBC1D30Q9Y2I9 924 aa17.29■□□□□ 0.36
SNX1-203ENST00000558040 UTP11Q9Y3A2 253 aaKnown RBP17.29■□□□□ 0.36
SNX1-203ENST00000558040 TARSL2A2RTX5 802 aaKnown RBP17.28■□□□□ 0.36
SNX1-203ENST00000558040 KCNN4O15554 427 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 HEXIM1O94992 359 aaKnown RBP17.28■□□□□ 0.36
SNX1-203ENST00000558040 NFATC1O95644 943 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 ADH1CP00326 375 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 HOXD9P28356 352 aaPredicted RBP17.28■□□□□ 0.36
SNX1-203ENST00000558040 ACTN2P35609 894 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 GNA12Q03113 381 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 ERCC6LQ2NKX8 1250 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 TANGO2Q6ICL3 276 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 ZNF354CQ86Y25 554 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 MFSD6LQ8IWD5 586 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 CCDC13Q8IYE1 715 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 CCDC33Q8N5R6 958 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 DEPDC1BQ8WUY9 529 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 HTR3CQ8WXA8 447 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 PPM1EQ8WY54 764 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 RUBCNQ92622 972 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 ATP2A3Q93084 1043 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 LRRC3BQ96PB8 259 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 TSGA13Q96PP4 275 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 LGMNQ99538 433 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 BBS2Q9BXC9 721 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 LINC00597Q9H2U6 94 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 NOL6Q9H6R4 1146 aaKnown RBP17.28■□□□□ 0.36
SNX1-203ENST00000558040 MARK1Q9P0L2 795 aa17.28■□□□□ 0.36
SNX1-203ENST00000558040 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.28■□□□□ 0.36
SNX1-203ENST00000558040 V9GYY5 206 aaPredicted RBP17.28■□□□□ 0.36
SNX1-203ENST00000558040 GRXCR2A6NFK2 248 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 CTIFO43310 598 aaKnown RBP17.27■□□□□ 0.36
SNX1-203ENST00000558040 MBTPS2O43462 519 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 ECI2O75521 394 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 PENKP01210 267 aaPredicted RBP17.27■□□□□ 0.36
SNX1-203ENST00000558040 IFNB1P01574 187 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 KRT14P02533 472 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 CCNCP24863 283 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 RBL1P28749 1068 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 PAPOLAP51003 745 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms