RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 DPYSL2Q16555 572 aa26.25■■□□□ 1.79
SMAD6-202ENST00000557916 RNF219Q5W0B1 726 aaPredicted RBP26.25■■□□□ 1.79
SMAD6-202ENST00000557916 TXNDC5Q8NBS9 432 aaKnown RBP26.25■■□□□ 1.79
SMAD6-202ENST00000557916 TTC17Q96AE7 1141 aa26.25■■□□□ 1.79
SMAD6-202ENST00000557916 TMEM248Q9NWD8 314 aa26.25■■□□□ 1.79
SMAD6-202ENST00000557916 C2orf42Q9NWW7 574 aa26.25■■□□□ 1.79
SMAD6-202ENST00000557916 SALL4Q9UJQ4 1053 aa26.25■■□□□ 1.79
SMAD6-202ENST00000557916 ADGRG1Q9Y653 693 aa26.25■■□□□ 1.79
SMAD6-202ENST00000557916 GALR2O43603 387 aaPredicted RBP26.24■■□□□ 1.79
SMAD6-202ENST00000557916 BUB1O43683 1085 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 BUB1BO60566 1050 aaPredicted RBP26.24■■□□□ 1.79
SMAD6-202ENST00000557916 SLC1A1P43005 524 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 MAPKAPK2P49137 400 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 CCR3P51677 355 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 ZNF135P52742 658 aaPredicted RBP26.24■■□□□ 1.79
SMAD6-202ENST00000557916 PLK1P53350 603 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 NAP1L1P55209 391 aaKnown RBP26.24■■□□□ 1.79
SMAD6-202ENST00000557916 SATB1Q01826 763 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 KIF5AQ12840 1032 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 E2F5Q15329 346 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 CHPFQ8IZ52 775 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 ACOX2Q99424 681 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 FEM1AQ9BSK4 669 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 MUC3BQ9H195 1237 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 CATSPERBQ9H7T0 1116 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 THAP10Q9P2Z0 257 aaPredicted RBP26.24■■□□□ 1.79
SMAD6-202ENST00000557916 MMP17Q9ULZ9 603 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 PLA2G4CQ9UP65 541 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 ZNF318Q5VUA4 2279 aa26.24■■□□□ 1.79
SMAD6-202ENST00000557916 ILVBLA1L0T0 632 aa26.23■■□□□ 1.79
SMAD6-202ENST00000557916 FGF10O15520 208 aaPredicted RBP26.23■■□□□ 1.79
SMAD6-202ENST00000557916 DAPK3O43293 454 aa26.23■■□□□ 1.79
SMAD6-202ENST00000557916 PTMAP06454 111 aaKnown RBP26.23■■□□□ 1.79
SMAD6-202ENST00000557916 KRT7P08729 469 aa26.23■■□□□ 1.79
SMAD6-202ENST00000557916 DLDP09622 509 aaKnown RBP26.23■■□□□ 1.79
SMAD6-202ENST00000557916 NUMBP49757 651 aa26.23■■□□□ 1.79
SMAD6-202ENST00000557916 SDE2Q6IQ49 451 aa26.23■■□□□ 1.79
SMAD6-202ENST00000557916 SYT13Q7L8C5 426 aa26.23■■□□□ 1.79
SMAD6-202ENST00000557916 CYB5D2Q8WUJ1 264 aa26.23■■□□□ 1.79
SMAD6-202ENST00000557916 ALG14Q96F25 216 aa26.23■■□□□ 1.79
SMAD6-202ENST00000557916 CALR3Q96L12 384 aaKnown RBP26.23■■□□□ 1.79
SMAD6-202ENST00000557916 NDFIP2Q9NV92 336 aa26.23■■□□□ 1.79
SMAD6-202ENST00000557916 POLR3BQ9NW08 1133 aaPredicted RBP26.23■■□□□ 1.79
SMAD6-202ENST00000557916 DNAI1Q9UI46 699 aa26.23■■□□□ 1.79
SMAD6-202ENST00000557916 VPS28Q9UK41 221 aa26.23■■□□□ 1.79
SMAD6-202ENST00000557916 A0A0U1RQJ8 604 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 SGK1O00141 431 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 NPC1O15118 1278 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 ASLP04424 464 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 GOT1P17174 413 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 NTSR1P30989 418 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 WASP42768 502 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 ZNF234Q14588 700 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 ATP13A4Q4VNC1 1196 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 EOGTQ5NDL2 527 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 RFX8Q6ZV50 586 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 RTL3Q8N8U3 475 aaKnown RBP26.22■■□□□ 1.79
SMAD6-202ENST00000557916 TPCN2Q8NHX9 752 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 ATRIPQ8WXE1 791 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 CACNA2D2Q9NY47 1150 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 CWC15Q9P013 229 aaKnown RBP26.22■■□□□ 1.79
SMAD6-202ENST00000557916 SLC8A2Q9UPR5 921 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 HYOU1Q9Y4L1 999 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 OR51B4Q9Y5P0 310 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 ALG6Q9Y672 507 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 DOCK4Q8N1I0 1966 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 SPOPO43791 374 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 ADAM23O75077 832 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 COMTP21964 271 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 ARL4AP40617 200 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 HCAR3P49019 387 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 CDH6P55285 790 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 KRT81Q14533 505 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 PTPRNQ16849 979 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 C11orf63Q6NUN7 778 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 ZNF783Q6ZMS7 281 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 POLNQ7Z5Q5 900 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 GOLPH3Q9H4A6 298 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 PCDH18Q9HCL0 1135 aa26.22■■□□□ 1.79
SMAD6-202ENST00000557916 A0A0D9SEW6 157 aa26.21■■□□□ 1.79
SMAD6-202ENST00000557916 WASH4PA8MWX3 477 aa26.21■■□□□ 1.79
SMAD6-202ENST00000557916 H3BRJ5 948 aa26.21■■□□□ 1.79
SMAD6-202ENST00000557916 IL12RB1P42701 662 aa26.21■■□□□ 1.79
SMAD6-202ENST00000557916 CTSOP43234 321 aaPredicted RBP26.21■■□□□ 1.79
SMAD6-202ENST00000557916 ECT2LQ008S8 904 aa26.21■■□□□ 1.79
SMAD6-202ENST00000557916 GNA12Q03113 381 aa26.21■■□□□ 1.79
SMAD6-202ENST00000557916 SULT2A1Q06520 285 aa26.21■■□□□ 1.79
SMAD6-202ENST00000557916 ANGPT1Q15389 498 aa26.21■■□□□ 1.79
SMAD6-202ENST00000557916 DAAM2Q86T65 1068 aa26.21■■□□□ 1.79
SMAD6-202ENST00000557916 MAML2Q8IZL2 1156 aaPredicted RBP26.21■■□□□ 1.79
SMAD6-202ENST00000557916 KCTD6Q8NC69 237 aa26.21■■□□□ 1.79
SMAD6-202ENST00000557916 PRMT8Q9NR22 394 aaPredicted RBP26.21■■□□□ 1.79
SMAD6-202ENST00000557916 TRIM10Q9UDY6 481 aa26.21■■□□□ 1.79
SMAD6-202ENST00000557916 STON1Q9Y6Q2 735 aa26.21■■□□□ 1.79
SMAD6-202ENST00000557916 WASH3PC4AMC7 463 aa26.2■■□□□ 1.78
SMAD6-202ENST00000557916 PAPSS2O95340 614 aaPredicted RBP26.2■■□□□ 1.78
SMAD6-202ENST00000557916 FNDC3BQ53EP0 1204 aaKnown RBP26.2■■□□□ 1.78
SMAD6-202ENST00000557916 ZFYVE27Q5T4F4 411 aa26.2■■□□□ 1.78
SMAD6-202ENST00000557916 RHOT1Q8IXI2 618 aa26.2■■□□□ 1.78
SMAD6-202ENST00000557916 OR7D4Q8NG98 312 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms