RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PRKCQQ04759 706 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 TMEM196Q5HYL7 178 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 RNF219Q5W0B1 726 aaPredicted RBP15.69■□□□□ 0.1
NEDD1-213ENST00000557644 FSTL4Q6MZW2 842 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 ZNF852Q6ZMS4 543 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 SPOCD1Q6ZMY3 1216 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 CCDC117Q8IWD4 279 aaPredicted RBP15.69■□□□□ 0.1
NEDD1-213ENST00000557644 RCOR2Q8IZ40 523 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 APCDD1Q8J025 514 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 TERB1Q8NA31 727 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 CELF6Q96J87 481 aaKnown RBP15.69■□□□□ 0.1
NEDD1-213ENST00000557644 WDR24Q96S15 920 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 FOXQ1Q9C009 403 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 SLC27A6Q9Y2P4 619 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 TBC1D3BA6NDS4 549 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 WASH4PA8MWX3 477 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 PDGFBP01127 241 aaPredicted RBP15.69■□□□□ 0.1
NEDD1-213ENST00000557644 EGFP01133 1207 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 RHOCP08134 193 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 PABPC1P11940 636 aaKnown RBP15.69■□□□□ 0.1
NEDD1-213ENST00000557644 STARD6P59095 220 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 ADCY2Q08462 1091 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 SIGLEC14Q08ET2 396 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 RPS6KA1Q15418 735 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 FUT11Q495W5 492 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 KAZNQ674X7 775 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 CCDC33Q8N5R6 958 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 OR7D4Q8NG98 312 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 RNF157Q96PX1 679 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 HERPUD2Q9BSE4 406 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 KLC2Q9H0B6 622 aa15.69■□□□□ 0.1
NEDD1-213ENST00000557644 KIAA1522Q9P206 1035 aaPredicted RBP15.69■□□□□ 0.1
NEDD1-213ENST00000557644 TECTAO75443 2155 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 MIA3Q5JRA6 1907 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.68■□□□□ 0.1
NEDD1-213ENST00000557644 ACVRL1P37023 503 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 MAPKAPK2P49137 400 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 TAZQ16635 292 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 C6orf118Q5T5N4 469 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 SETD3Q86TU7 594 aaPredicted RBP15.68■□□□□ 0.1
NEDD1-213ENST00000557644 ADIPOR2Q86V24 386 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 SORCS1Q8WY21 1168 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 ALG14Q96F25 216 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 RBM41Q96IZ5 413 aaKnown RBP15.68■□□□□ 0.1
NEDD1-213ENST00000557644 FEM1AQ9BSK4 669 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 HEMGNQ9BXL5 484 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 COL25A1Q9BXS0 654 aaPredicted RBP15.68■□□□□ 0.1
NEDD1-213ENST00000557644 MUC3BQ9H195 1237 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 ZDHHC4Q9NPG8 344 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 JRKLQ9Y4A0 524 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 OR51B4Q9Y5P0 310 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 MAN2B1O00754 1011 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 FANCGO15287 622 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 MAP3K6O95382 1288 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 ATP1A1P05023 1023 aaKnown RBP15.68■□□□□ 0.1
NEDD1-213ENST00000557644 TARSP26639 723 aaKnown RBP15.68■□□□□ 0.1
NEDD1-213ENST00000557644 GRIA2P42262 883 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 DYNLT1P63172 113 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 TFDP3Q5H9I0 405 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 NCBP2-AS2Q69YL0 99 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 TMCO3Q6UWJ1 677 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 KIAA0907Q7Z7F0 614 aaPredicted RBP15.68■□□□□ 0.1
NEDD1-213ENST00000557644 RFX6Q8HWS3 928 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.68■□□□□ 0.1
NEDD1-213ENST00000557644 MSANTD3Q96H12 275 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 TBC1D17Q9HA65 648 aa15.68■□□□□ 0.1
NEDD1-213ENST00000557644 RBM12Q9NTZ6 932 aaKnown RBP15.68■□□□□ 0.1
NEDD1-213ENST00000557644 hCG_1818297A0A087WSY0 165 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 KANSL1LA0AUZ9 987 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 K7EQS6 105 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 STK25O00506 426 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 RAMP2O60895 175 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 APODP05090 189 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 GLDCP23378 1020 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 CXCR5P32302 372 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 GNA12Q03113 381 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 GRSF1Q12849 480 aaKnown RBP eCLIP15.67■□□□□ 0.1
NEDD1-213ENST00000557644 UBXN2BQ14CS0 331 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 PLEKHG6Q3KR16 790 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 PITRM1Q5JRX3 1037 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 EMC10Q5UCC4 262 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 TRIM67Q6ZTA4 783 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 ZNF687Q8N1G0 1237 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 SHDQ96IW2 340 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 MAK16Q9BXY0 300 aaKnown RBP15.67■□□□□ 0.1
NEDD1-213ENST00000557644 VPS28Q9UK41 221 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 KIAA1549LQ6ZVL6 1849 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 ILVBLA1L0T0 632 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 KCNK3O14649 394 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 ALADP13716 330 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 DEKP35659 375 aaKnown RBP15.67■□□□□ 0.1
NEDD1-213ENST00000557644 SEC13P55735 322 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 CCINQ13939 588 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 POLD3Q15054 466 aaPredicted RBP15.67■□□□□ 0.1
NEDD1-213ENST00000557644 VSIG1Q86XK7 387 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 ARHGAP12Q8IWW6 846 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 UMODL1-AS1Q8N2C9 162 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 PLD5Q8N7P1 536 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 HMCESQ96FZ2 354 aa15.67■□□□□ 0.1
NEDD1-213ENST00000557644 SPON2Q9BUD6 331 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms