RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 VPS33BQ9H267 617 aa4.66□□□□□ -1.66
VRK1-207ENST00000557352 ZNF304Q9HCX3 659 aa4.66□□□□□ -1.66
VRK1-207ENST00000557352 CD93Q9NPY3 652 aa4.66□□□□□ -1.66
VRK1-207ENST00000557352 CHPF2Q9P2E5 772 aa4.66□□□□□ -1.66
VRK1-207ENST00000557352 SLC39A10Q9ULF5 831 aa4.66□□□□□ -1.66
VRK1-207ENST00000557352 PTGDR2Q9Y5Y4 395 aa4.66□□□□□ -1.66
VRK1-207ENST00000557352 A0A1B0GVT2 93 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 OR6C75A6NL08 312 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 KIF28PB7ZC32 967 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 MCIDASD6RGH6 385 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 RGS14O43566 566 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 ARSBP15848 533 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 RFX5P48382 616 aaPredicted RBP4.65□□□□□ -1.67
VRK1-207ENST00000557352 POLE2P56282 527 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 RBM6P78332 1123 aaKnown RBP4.65□□□□□ -1.67
VRK1-207ENST00000557352 Q0VFX4 171 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 TRAF1Q13077 416 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 ARL13AQ5H913 290 aaPredicted RBP4.65□□□□□ -1.67
VRK1-207ENST00000557352 NRSN1Q8IZ57 195 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 ENGASEQ8NFI3 743 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 GABPB2Q8TAK5 448 aaPredicted RBP4.65□□□□□ -1.67
VRK1-207ENST00000557352 CLEC4CQ8WTT0 213 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 KIAA1191Q96A73 305 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 LMLNQ96KR4 655 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 CCDC138Q96M89 665 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 WDR77Q9BQA1 342 aaPredicted RBP4.65□□□□□ -1.67
VRK1-207ENST00000557352 MECRQ9BV79 373 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 DCLK3Q9C098 648 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 PNRC2Q9NPJ4 139 aaKnown RBP4.65□□□□□ -1.67
VRK1-207ENST00000557352 NCKIPSDQ9NZQ3 722 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 NFU1Q9UMS0 254 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 DTX4Q9Y2E6 619 aa4.65□□□□□ -1.67
VRK1-207ENST00000557352 COPG1Q9Y678 874 aaKnown RBP4.65□□□□□ -1.67
VRK1-207ENST00000557352 TBC1D3DA0A087WVF3 549 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 TBC1D3IA0A087WXS9 549 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 TBC1D3EA0A087X179 549 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 TBC1D3KA0A087X1G2 549 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 CLEC18AA5D8T8 446 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 TBC1D3BA6NDS4 549 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 TBC1D3FA6NER0 549 aaPredicted RBP4.64□□□□□ -1.67
VRK1-207ENST00000557352 TBC1D3LB9A6J9 549 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 SPRY3O43610 288 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 PAPSS2O95340 614 aaPredicted RBP4.64□□□□□ -1.67
VRK1-207ENST00000557352 LCATP04180 440 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 TBC1D3HP0C7X1 549 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 CHRNA5P30532 468 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 AKT1P31749 480 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 SLC16A2P36021 539 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 PCYT1AP49585 367 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 DSCR9P59020 149 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 CRYZQ08257 329 aaKnown RBP4.64□□□□□ -1.67
VRK1-207ENST00000557352 HYAL1Q12794 435 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 GPS2Q13227 327 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 GPR18Q14330 331 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 HLTFQ14527 1009 aaKnown RBP eCLIP4.64□□□□□ -1.67
VRK1-207ENST00000557352 ZNF569Q5MCW4 686 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 TBC1D3GQ6DHY5 549 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 NADSYN1Q6IA69 706 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 TBC1D3CQ6IPX1 549 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 MORC1Q86VD1 984 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 KLBQ86Z14 1044 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 TBC1D3Q8IZP1 549 aaPredicted RBP4.64□□□□□ -1.67
VRK1-207ENST00000557352 KDM1BQ8NB78 822 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 CLEC18CQ8NCF0 446 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 PRPF18Q99633 342 aaKnown RBP4.64□□□□□ -1.67
VRK1-207ENST00000557352 SORBS1Q9BX66 1292 aaKnown RBP4.64□□□□□ -1.67
VRK1-207ENST00000557352 RNF146Q9NTX7 359 aa4.64□□□□□ -1.67
VRK1-207ENST00000557352 BAZ1AQ9NRL2 1556 aaPredicted RBP4.64□□□□□ -1.67
VRK1-207ENST00000557352 IFITM10A6NMD0 228 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 DNPH1O43598 174 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 HOXD3P31249 432 aaPredicted RBP4.63□□□□□ -1.67
VRK1-207ENST00000557352 STAT1P42224 750 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 AK2P54819 239 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 SELENOVP59797 346 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 ABATP80404 500 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 RHAGQ02094 409 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 DCAF12L2Q5VW00 463 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 KSR2Q6VAB6 950 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 FAM217AQ8IXS0 508 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 CADM3Q8N126 398 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 MUL1Q969V5 352 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 SEZ6LQ9BYH1 1024 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 FRMD8Q9BZ67 464 aaPredicted RBP4.63□□□□□ -1.67
VRK1-207ENST00000557352 TP63Q9H3D4 680 aaPredicted RBP4.63□□□□□ -1.67
VRK1-207ENST00000557352 FNIP2Q9P278 1114 aa4.63□□□□□ -1.67
VRK1-207ENST00000557352 MAGED2Q9UNF1 606 aaPredicted RBP4.63□□□□□ -1.67
VRK1-207ENST00000557352 PEG3Q9GZU2 1588 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 SMARCA4P51532 1647 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 TRBV5-7A0A0A0MS05 114 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 SLC38A8A6NNN8 435 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 I6L893 689 aaPredicted RBP4.62□□□□□ -1.67
VRK1-207ENST00000557352 MT3P25713 68 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 TNFSF8P32971 234 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 ZBTB16Q05516 673 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 RNASELQ05823 741 aaKnown RBP4.62□□□□□ -1.67
VRK1-207ENST00000557352 SF3A3Q12874 501 aaKnown RBP eCLIP4.62□□□□□ -1.67
VRK1-207ENST00000557352 OTUD1Q5VV17 481 aaPredicted RBP4.62□□□□□ -1.67
VRK1-207ENST00000557352 AAGABQ6PD74 315 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 IGFN1Q86VF2 1251 aa4.62□□□□□ -1.67
VRK1-207ENST00000557352 FAM110DQ8TAY7 271 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms