RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 GM2AP17900 193 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 GSTM5P46439 218 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 GLIPR1P48060 266 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 SLC37A1P57057 533 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 ACSM2AQ08AH3 577 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 PIK3AP1Q6ZUJ8 805 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 ZNF771Q7L3S4 317 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-218ENST00000556256 FAM217AQ8IXS0 508 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 SLC25A41Q8N5S1 370 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 KDM1BQ8NB78 822 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 MSLNLQ96KJ4 702 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 FIZ1Q96SL8 496 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 SARGQ9BW04 601 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 LRRC27Q9C0I9 530 aa3.67□□□□□ -1.82
SCFD1-218ENST00000556256 PNRC2Q9NPJ4 139 aaKnown RBP3.67□□□□□ -1.82
SCFD1-218ENST00000556256 HEYLQ9NQ87 328 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-218ENST00000556256 FRMPD2Q68DX3 1309 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-218ENST00000556256 A0A087WZ62 844 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 MS4A18H0YCH9 400 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 TPP1O14773 563 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 ZSCAN9O15535 394 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-218ENST00000556256 LCKP06239 509 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 CHRNB2P17787 502 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 TUBA1BP68363 451 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 NSUN2Q08J23 767 aaKnown RBP eCLIP3.66□□□□□ -1.82
SCFD1-218ENST00000556256 HLFQ16534 295 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 DUSP6Q16828 381 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 MAP9Q49MG5 647 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 ALG10Q5BKT4 473 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 ALG10BQ5I7T1 473 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 C16orf89Q6UX73 402 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 KRT28Q7Z3Y7 464 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 CAMK1DQ8IU85 385 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 CCDC146Q8IYE0 955 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 TCP11L2Q8N4U5 519 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 OR14A16Q8NHC5 309 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 CTCFLQ8NI51 663 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-218ENST00000556256 FAM216AQ8WUB2 273 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 SLC39A13Q96H72 371 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 EGLN1Q9GZT9 426 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 OCIAD1Q9NX40 245 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 TMOD4Q9NZQ9 345 aa3.66□□□□□ -1.82
SCFD1-218ENST00000556256 COQ9O75208 318 aa3.65□□□□□ -1.83
SCFD1-218ENST00000556256 HNF4GQ14541 408 aa3.65□□□□□ -1.83
SCFD1-218ENST00000556256 RRAGBQ5VZM2 374 aa3.65□□□□□ -1.83
SCFD1-218ENST00000556256 PMS2CLQ68D20 193 aa3.65□□□□□ -1.83
SCFD1-218ENST00000556256 SRFBP1Q8NEF9 429 aaKnown RBP3.65□□□□□ -1.83
SCFD1-218ENST00000556256 TTC17Q96AE7 1141 aa3.65□□□□□ -1.83
SCFD1-218ENST00000556256 EIF3CQ99613 913 aaKnown RBP3.65□□□□□ -1.83
SCFD1-218ENST00000556256 FAM204AQ9H8W3 233 aa3.65□□□□□ -1.83
SCFD1-218ENST00000556256 TNFSF13BQ9Y275 285 aa3.65□□□□□ -1.83
SCFD1-218ENST00000556256 LMTK3Q96Q04 1460 aa3.65□□□□□ -1.83
SCFD1-218ENST00000556256 LMX1BO60663 402 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 KRT18P05783 430 aaKnown RBP3.64□□□□□ -1.83
SCFD1-218ENST00000556256 MYL1P05976 194 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 TNFSF8P32971 234 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 SLC16A2P36021 539 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 SEMA5AQ13591 1074 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 GALNT3Q14435 633 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 C10orf76Q5T2E6 689 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 FAXCQ5TGI0 409 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 RNF220Q5VTB9 566 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 CRTC1Q6UUV9 634 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 DCUN1D3Q8IWE4 304 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 FAM156AQ8NDB6 213 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 PJA1Q8NG27 643 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 LILRB1Q8NHL6 650 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-218ENST00000556256 LRTOMTQ8WZ04 291 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 IP6K1Q92551 441 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 APOLD1Q96LR9 279 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 B3GNT4Q9C0J1 378 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 ZNF700Q9H0M5 742 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 TXNRD2Q9NNW7 524 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 CHST12Q9NRB3 414 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 RNF146Q9NTX7 359 aa3.64□□□□□ -1.83
SCFD1-218ENST00000556256 ANO9A1A5B4 782 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 F8W8V4 182 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 MSI1O43347 362 aaKnown RBP3.63□□□□□ -1.83
SCFD1-218ENST00000556256 KCNJ13O60928 360 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 SLC5A1P13866 664 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 CACNB3P54284 484 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 FAM193AP78312 1265 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 SHC2P98077 582 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 UBE4AQ14139 1066 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 POLD3Q15054 466 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-218ENST00000556256 P3H1Q32P28 736 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 ADGRF3Q8IZF5 1079 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 SVIPQ8NHG7 77 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 EPYCQ99645 322 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 ZNF304Q9HCX3 659 aa3.63□□□□□ -1.83
SCFD1-218ENST00000556256 STMND1H3BQB6 276 aa3.62□□□□□ -1.83
SCFD1-218ENST00000556256 APAF1O14727 1248 aa3.62□□□□□ -1.83
SCFD1-218ENST00000556256 TBX6O95947 436 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-218ENST00000556256 ANXA2P07355 339 aaKnown RBP3.62□□□□□ -1.83
SCFD1-218ENST00000556256 BNC1Q01954 994 aa3.62□□□□□ -1.83
SCFD1-218ENST00000556256 ARL16Q0P5N6 197 aa3.62□□□□□ -1.83
SCFD1-218ENST00000556256 CBFBQ13951 182 aa3.62□□□□□ -1.83
SCFD1-218ENST00000556256 CCDC6Q16204 474 aa3.62□□□□□ -1.83
SCFD1-218ENST00000556256 STPG1Q5TH74 334 aa3.62□□□□□ -1.83
SCFD1-218ENST00000556256 KSR2Q6VAB6 950 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms