RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 ITPRIPL1Q6GPH6 555 aa15.08■□□□□ 0
VPS33B-205ENST00000556096 ADGRD1Q6QNK2 874 aa15.08■□□□□ 0
VPS33B-205ENST00000556096 PDCD7Q8N8D1 485 aaKnown RBP15.08■□□□□ 0
VPS33B-205ENST00000556096 ZSCAN18Q8TBC5 510 aaPredicted RBP15.08■□□□□ 0
VPS33B-205ENST00000556096 CELF6Q96J87 481 aaKnown RBP15.08■□□□□ 0
VPS33B-205ENST00000556096 XPO6Q96QU8 1125 aaKnown RBP15.08■□□□□ 0
VPS33B-205ENST00000556096 EBNA1BP2Q99848 306 aaKnown RBP15.08■□□□□ 0
VPS33B-205ENST00000556096 SELENOSQ9BQE4 189 aa15.08■□□□□ 0
VPS33B-205ENST00000556096 EPN3Q9H201 632 aa15.08■□□□□ 0
VPS33B-205ENST00000556096 SENP1Q9P0U3 644 aa15.08■□□□□ 0
VPS33B-205ENST00000556096 STK39Q9UEW8 545 aa15.08■□□□□ 0
VPS33B-205ENST00000556096 ZC3H7BQ9UGR2 993 aaKnown RBP15.08■□□□□ 0
VPS33B-205ENST00000556096 TBK1Q9UHD2 729 aa15.08■□□□□ 0
VPS33B-205ENST00000556096 YBX2Q9Y2T7 364 aaKnown RBP15.08■□□□□ 0
VPS33B-205ENST00000556096 HBS1LQ9Y450 684 aaKnown RBP15.08■□□□□ 0
VPS33B-205ENST00000556096 PLXNA4Q9HCM2 1894 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 IGLV3-10A0A075B6K4 115 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 SLC12A8A0AV02 714 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 ERI2A8K979 691 aaKnown RBP15.07■□□□□ 0
VPS33B-205ENST00000556096 C2CD2LO14523 706 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 TLR5O60602 858 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 SEC24AO95486 1093 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 CSH1P0DML2 217 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 CSH2P0DML3 217 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 CHN1P15882 459 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 RHOQP17081 205 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 STX2P32856 288 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 RAB33AQ14088 237 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 TMED2Q15363 201 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 TRABD2AQ86V40 505 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 NLRP14Q86W24 1093 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 MYRFLQ96LU7 910 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 TEKT5Q96M29 485 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 PBX4Q9BYU1 374 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 CEP41Q9BYV8 373 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 SLC39A8Q9C0K1 460 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 GBA3Q9H227 469 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 MAFFQ9ULX9 164 aa15.07■□□□□ 0
VPS33B-205ENST00000556096 MAGED2Q9UNF1 606 aaPredicted RBP15.07■□□□□ 0
VPS33B-205ENST00000556096 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.06■□□□□ 0
VPS33B-205ENST00000556096 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.06■□□□□ 0
VPS33B-205ENST00000556096 TCRBV9S1A1TA0A576 114 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 SOX1O00570 391 aaPredicted RBP15.06■□□□□ 0
VPS33B-205ENST00000556096 ZBTB24O43167 697 aaPredicted RBP15.06■□□□□ 0
VPS33B-205ENST00000556096 SUN1O94901 812 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 CPP00450 1065 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 CA3P07451 260 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 PPM1AP35813 382 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 GRIA1P42261 906 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 NUGGCQ68CJ6 796 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 KLHDC10Q6PID8 442 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 CYS1Q717R9 158 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 MIB1Q86YT6 1006 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 CCNJLQ8IV13 435 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 KLHDC8BQ8IXV7 354 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 UMODL1-AS1Q8N2C9 162 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 MDM1Q8TC05 714 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 PHOSPHO2Q8TCD6 241 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 DEPDC1BQ8WUY9 529 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 ZYG11BQ9C0D3 744 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 NKX2-4Q9H2Z4 354 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 CCSER2Q9H7U1 834 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 SDR42E2A6NKP2 422 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 DRGXA6NNA5 263 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 RASA4BC9J798 803 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 DFFAO00273 331 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 MATN3O15232 486 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 PSMD3O43242 534 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 RASA4O43374 803 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 CACNG3O60359 315 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 MAFKO60675 156 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 AP2A1O95782 977 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 URODP06132 367 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 BRAFP15056 766 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 HMGA1P17096 107 aaKnown RBP15.06■□□□□ 0
VPS33B-205ENST00000556096 PRKCHP24723 683 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 CD68P34810 354 aaPredicted RBP15.06■□□□□ 0
VPS33B-205ENST00000556096 ATP5C1P36542 298 aaKnown RBP15.06■□□□□ 0
VPS33B-205ENST00000556096 MSH2P43246 934 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 ALDH1A3P47895 512 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 NDST2P52849 883 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 ZBTB17Q13105 803 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 KCTD11Q693B1 232 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 TIGD7Q6NT04 549 aaPredicted RBP15.06■□□□□ 0
VPS33B-205ENST00000556096 FIBCD1Q8N539 461 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 ATPAF2Q8N5M1 289 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 DCAKDQ8WVC6 231 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 TRMT2BQ96GJ1 504 aaKnown RBP15.06■□□□□ 0
VPS33B-205ENST00000556096 PAFAH2Q99487 392 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 PRMT1Q99873 361 aaKnown RBP15.06■□□□□ 0
VPS33B-205ENST00000556096 GORASP1Q9BQQ3 440 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 CERS4Q9HA82 394 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 CYP4F11Q9HBI6 524 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 PLAC1Q9HBJ0 212 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 INTS9Q9NV88 658 aaKnown RBP15.06■□□□□ 0
VPS33B-205ENST00000556096 TMEM248Q9NWD8 314 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 RSPH14Q9UHP6 348 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 DNMT3LQ9UJW3 386 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 TTLL3Q9Y4R7 772 aa15.06■□□□□ 0
VPS33B-205ENST00000556096 INSL6Q9Y581 213 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms