RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 FZD4Q9ULV1 537 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 HSF4Q9ULV5 492 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 GDAQ9Y2T3 454 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 LRP12Q9Y561 859 aa5.91□□□□□ -1.46
VRK1-205ENST00000555402 COPG1Q9Y678 874 aaKnown RBP5.91□□□□□ -1.46
VRK1-205ENST00000555402 B4E171 279 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 CLIC1O00299 241 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 INSIG1O15503 277 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 MBPP02686 304 aaPredicted RBP5.9□□□□□ -1.46
VRK1-205ENST00000555402 PRKCHP24723 683 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 PSMC2P35998 433 aaKnown RBP5.9□□□□□ -1.46
VRK1-205ENST00000555402 TSPAN7P41732 249 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 CASP6P55212 293 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 WDR5P61964 334 aaKnown RBP5.9□□□□□ -1.46
VRK1-205ENST00000555402 CDK18Q07002 472 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 GALNT2Q10471 571 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 NFIL3Q16649 462 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 SLC9C2Q5TAH2 1124 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 LIPMQ5VYY2 423 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 DENND1BQ6P3S1 775 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 TMEM88Q6PEY1 159 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 KYAT3Q6YP21 454 aaKnown RBP5.9□□□□□ -1.46
VRK1-205ENST00000555402 PCGF5Q86SE9 256 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 TERB1Q8NA31 727 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 RNF125Q96EQ8 232 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 THAP7Q9BT49 309 aaPredicted RBP5.9□□□□□ -1.46
VRK1-205ENST00000555402 HTATIP2Q9BUP3 242 aa5.9□□□□□ -1.46
VRK1-205ENST00000555402 QTRT1Q9BXR0 403 aaKnown RBP5.9□□□□□ -1.46
VRK1-205ENST00000555402 STN1Q9H668 368 aaKnown RBP5.9□□□□□ -1.46
VRK1-205ENST00000555402 HEMK1Q9Y5R4 338 aaPredicted RBP5.9□□□□□ -1.46
VRK1-205ENST00000555402 TTBK1Q5TCY1 1321 aaPredicted RBP5.9□□□□□ -1.47
VRK1-205ENST00000555402 ITIH6Q6UXX5 1313 aa5.9□□□□□ -1.47
VRK1-205ENST00000555402 CYP3A7-CYP3A51PA0A087WV96 503 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 GUCY1B2O75343 617 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 GCATO75600 419 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 TBX18O95935 607 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 MT-CO3P00414 261 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 APEHP13798 732 aaKnown RBP5.89□□□□□ -1.47
VRK1-205ENST00000555402 DRD4P21917 467 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 CYP3A7P24462 503 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 MAN1A1P33908 653 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 VPS41P49754 854 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 POLGP54098 1239 aaPredicted RBP5.89□□□□□ -1.47
VRK1-205ENST00000555402 CYP4F2P78329 520 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 RPP30P78346 268 aaKnown RBP5.89□□□□□ -1.47
VRK1-205ENST00000555402 TBL3Q12788 808 aaKnown RBP5.89□□□□□ -1.47
VRK1-205ENST00000555402 THOC5Q13769 683 aaKnown RBP5.89□□□□□ -1.47
VRK1-205ENST00000555402 TMEM63BQ5T3F8 832 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 ACAD10Q6JQN1 1059 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 SLC18B1Q6NT16 456 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 TMEM65Q6PI78 240 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 SERPINA13PQ6UXR4 307 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 DSTYKQ6XUX3 929 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 SLC39A5Q6ZMH5 540 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 C1orf122Q6ZSJ8 110 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 TBC1D1Q86TI0 1168 aaPredicted RBP5.89□□□□□ -1.47
VRK1-205ENST00000555402 ADPRHL1Q8NDY3 354 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 TBC1D5Q92609 795 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 DAZAP1Q96EP5 407 aaKnown RBP5.89□□□□□ -1.47
VRK1-205ENST00000555402 MACROD1Q9BQ69 325 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 OLA1Q9NTK5 396 aaKnown RBP5.89□□□□□ -1.47
VRK1-205ENST00000555402 MTMR4Q9NYA4 1195 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 ELOVL5Q9NYP7 299 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 CNOT7Q9UIV1 285 aaKnown RBP5.89□□□□□ -1.47
VRK1-205ENST00000555402 B3GNT3Q9Y2A9 372 aa5.89□□□□□ -1.47
VRK1-205ENST00000555402 TARM1B6A8C7 271 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 KAT7O95251 611 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 HNRNPCP07910 306 aaKnown RBP eCLIP5.88□□□□□ -1.47
VRK1-205ENST00000555402 SNHG28P0DPA3 235 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 STAT6P42226 847 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 PAFAH1B1P43034 410 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 RXRGP48443 463 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 GAB1Q13480 694 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 TDGQ13569 410 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 ALKBH1Q13686 389 aaKnown RBP5.88□□□□□ -1.47
VRK1-205ENST00000555402 KCNB1Q14721 858 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 CCDC30Q5VVM6 783 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 C4orf50Q6ZRC1 276 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 DCDC5Q6ZRR9 648 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 BCDIN3DQ7Z5W3 292 aaKnown RBP5.88□□□□□ -1.47
VRK1-205ENST00000555402 SAMD14Q8IZD0 417 aaPredicted RBP5.88□□□□□ -1.47
VRK1-205ENST00000555402 APOPT1Q96IL0 206 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 CCDC17Q96LX7 622 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 GPR78Q96P69 363 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 RNF26Q9BY78 433 aaPredicted RBP5.88□□□□□ -1.47
VRK1-205ENST00000555402 AGXT2Q9BYV1 514 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 TRIM31Q9BZY9 425 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 TRIM2Q9C040 744 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 THAP1Q9NVV9 213 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 ASNSD1Q9NWL6 643 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 ALKBH4Q9NXW9 302 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 AASSQ9UDR5 926 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 SWAP70Q9UH65 585 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 SLC25A13Q9UJS0 675 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 CYP46A1Q9Y6A2 500 aa5.88□□□□□ -1.47
VRK1-205ENST00000555402 PPP6CO00743 305 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 BAIAP3O94812 1187 aa5.87□□□□□ -1.47
VRK1-205ENST00000555402 RTN3O95197 1032 aaPredicted RBP5.87□□□□□ -1.47
VRK1-205ENST00000555402 TOP3BO95985 862 aaKnown RBP5.87□□□□□ -1.47
VRK1-205ENST00000555402 BDNFP23560 247 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms