RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 LRRC31Q6UY01 552 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 MMS22LQ6ZRQ5 1243 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 APTXQ7Z2E3 356 aaKnown RBP12.19□□□□□ -0.46
VRK1-204ENST00000555351 PIP4P1Q86T03 277 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 SETD3Q86TU7 594 aaPredicted RBP12.19□□□□□ -0.46
VRK1-204ENST00000555351 APCDD1Q8J025 514 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 HDDC3Q8N4P3 179 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 ZNF366Q8N895 744 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 CPA5Q8WXQ8 436 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 IGSF8Q969P0 613 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 ERLEC1Q96DZ1 483 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 FEM1AQ9BSK4 669 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 TKTL2Q9H0I9 626 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 PABPC3Q9H361 631 aaKnown RBP12.19□□□□□ -0.46
VRK1-204ENST00000555351 SLC32A1Q9H598 525 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 COX16Q9P0S2 106 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 VANGL2Q9ULK5 521 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 MYO6Q9UM54 1294 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.19□□□□□ -0.46
VRK1-204ENST00000555351 OR51B4Q9Y5P0 310 aa12.19□□□□□ -0.46
VRK1-204ENST00000555351 NYNRINQ9P2P1 1898 aaKnown RBP12.19□□□□□ -0.46
VRK1-204ENST00000555351 NCOR2Q9Y618 2525 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 C10orf142B7Z368 130 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 ALOX15BO15296 676 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 BCAT2O15382 392 aaPredicted RBP12.18□□□□□ -0.46
VRK1-204ENST00000555351 ATP9BO43861 1147 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 ADCY5O95622 1261 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 SEMA4FO95754 770 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 ZNF883P0CG24 379 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 PDGFRAP16234 1089 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 CHRNB2P17787 502 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 C5AR1P21730 350 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 ACSL1P33121 698 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 RDXP35241 583 aaKnown RBP12.18□□□□□ -0.46
VRK1-204ENST00000555351 FLT3P36888 993 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 PI4KAP42356 2102 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 RNASE9P60153 205 aaKnown RBP12.18□□□□□ -0.46
VRK1-204ENST00000555351 NRG1Q02297 640 aaPredicted RBP12.18□□□□□ -0.46
VRK1-204ENST00000555351 CENPCQ03188 943 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 UBXN1Q04323 297 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 TYRO3Q06418 890 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 CST6Q15828 149 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 N4BP2L1Q5TBK1 243 aaPredicted RBP12.18□□□□□ -0.46
VRK1-204ENST00000555351 PPP1R2P3Q6NXS1 205 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 LRSAM1Q6UWE0 723 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 ZNF783Q6ZMS7 281 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 DSG4Q86SJ6 1040 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 ZNF683Q8IZ20 524 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 MINDY1Q8N5J2 469 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 FRS2Q8WU20 508 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 PTPRN2Q92932 1015 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 FAM129BQ96TA1 746 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 TBCBQ99426 244 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 ADAM33Q9BZ11 813 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 HSD3B7Q9H2F3 369 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 KDM4CQ9H3R0 1056 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 NLRC4Q9NPP4 1024 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 SLCO3A1Q9UIG8 710 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 SLC25A13Q9UJS0 675 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 HS3ST2Q9Y278 367 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 LAMA1P25391 3075 aa12.18□□□□□ -0.46
VRK1-204ENST00000555351 SMTNL1A8MU46 457 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 TTC34A8MYJ7 566 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 EPHB6O15197 1021 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 GJB3O75712 270 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 CALB1P05937 261 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 UNGP13051 313 aaPredicted RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 TFE3P19532 575 aaPredicted RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 CD27P26842 260 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 MZF1P28698 734 aaPredicted RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 CTSOP43234 321 aaPredicted RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 PTPN9P43378 593 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 MAPK8P45983 427 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 KLK7P49862 253 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 NOVA1P51513 510 aaKnown RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 AFF3P51826 1226 aaKnown RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 KRT83P78385 493 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 C6orf118Q5T5N4 469 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 SH3PXD2AQ5TCZ1 1133 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 PSAPL1Q6NUJ1 521 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 STRADAQ7RTN6 431 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 PHF13Q86YI8 300 aaPredicted RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 DHX40Q8IX18 779 aaKnown RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 SLC20A1Q8WUM9 679 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 CENPIQ92674 756 aaPredicted RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 FAM131CQ96AQ9 280 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 PCMTD1Q96MG8 357 aaPredicted RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 C2orf49Q9BVC5 232 aaPredicted RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 SIK2Q9H0K1 926 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 C6orf106Q9H6K1 298 aaPredicted RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 FBXL12Q9NXK8 326 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 TMEM63CQ9P1W3 806 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 PPARGC1AQ9UBK2 798 aaKnown RBP12.17□□□□□ -0.46
VRK1-204ENST00000555351 VPS28Q9UK41 221 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 ANGPTL2Q9UKU9 493 aa12.17□□□□□ -0.46
VRK1-204ENST00000555351 CACNA1EQ15878 2313 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 ILVBLA1L0T0 632 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 LRRC72A6NJI9 287 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 C2CD4BA6NLJ0 364 aa12.16□□□□□ -0.46
VRK1-204ENST00000555351 GOLGA8SH3BPF8 625 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms