RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 EZH1Q92800 747 aaPredicted RBP13.03□□□□□ -0.32
SYNE2-219ENST00000555323 RNF157Q96PX1 679 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 FEM1AQ9BSK4 669 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 COL25A1Q9BXS0 654 aaPredicted RBP13.03□□□□□ -0.32
SYNE2-219ENST00000555323 LTB4R2Q9NPC1 389 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 ARHGEF4Q9NR80 690 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 NDFIP2Q9NV92 336 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
SYNE2-219ENST00000555323 GGA2Q9UJY4 613 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 INTS6Q9UL03 887 aaKnown RBP13.03□□□□□ -0.32
SYNE2-219ENST00000555323 EFR3BQ9Y2G0 817 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 JRKLQ9Y4A0 524 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 TICRRQ7Z2Z1 1910 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 MUC3AQ02505 3323 aa13.03□□□□□ -0.32
SYNE2-219ENST00000555323 CXorf51AA0A1B0GTR3 108 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 LRRD1A4D1F6 860 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 TBC1D3BA6NDS4 549 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 PRRT4C9JH25 899 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 TNFRSF10AO00220 468 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 DAPK3O43293 454 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 KIF5CO60282 957 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 APODP05090 189 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 CHRM1P11229 460 aaPredicted RBP13.02□□□□□ -0.33
SYNE2-219ENST00000555323 CHRNB1P11230 501 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 TNNT1P13805 278 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 CD72P21854 359 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 CD70P32970 193 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 PTPN7P35236 360 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 GJC1P36383 396 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 CDKN2BP42772 138 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 VASPP50552 380 aaPredicted RBP13.02□□□□□ -0.33
SYNE2-219ENST00000555323 NDST2P52849 883 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 EIF4HQ15056 248 aaKnown RBP13.02□□□□□ -0.33
SYNE2-219ENST00000555323 PPP2R5EQ16537 467 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 FBXO43Q4G163 708 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 TFDP3Q5H9I0 405 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 DGKKQ5KSL6 1271 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 ZFYVE27Q5T4F4 411 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 AFMIDQ63HM1 303 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 TMEM215Q68D42 235 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 MFSD7Q6UXD7 560 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 BMP8AQ7Z5Y6 402 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 ANKS1BQ7Z6G8 1248 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 TFAP2DQ7Z6R9 452 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 AHI1Q8N157 1196 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 SYNPOQ8N3V7 929 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 PQLC3Q8N755 202 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 UBL4BQ8N7F7 174 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 TTC17Q96AE7 1141 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 RNF25Q96BH1 459 aaPredicted RBP13.02□□□□□ -0.33
SYNE2-219ENST00000555323 TRIM44Q96DX7 344 aaPredicted RBP13.02□□□□□ -0.33
SYNE2-219ENST00000555323 RBM41Q96IZ5 413 aaKnown RBP13.02□□□□□ -0.33
SYNE2-219ENST00000555323 TLR10Q9BXR5 811 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 CALN1Q9BXU9 219 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 ACE2Q9BYF1 805 aaPredicted RBP13.02□□□□□ -0.33
SYNE2-219ENST00000555323 MAGEH1Q9H213 219 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 NOL6Q9H6R4 1146 aaKnown RBP13.02□□□□□ -0.33
SYNE2-219ENST00000555323 LRRC19Q9H756 370 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 ABCB8Q9NUT2 735 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 KLHL11Q9NVR0 708 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 PACSIN2Q9UNF0 486 aaPredicted RBP13.02□□□□□ -0.33
SYNE2-219ENST00000555323 ZKSCAN5Q9Y2L8 839 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 A0A0C4DFX4 3053 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 NCOR1O75376 2440 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 COL4A3Q01955 1670 aa13.02□□□□□ -0.33
SYNE2-219ENST00000555323 DOCK4Q8N1I0 1966 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 A0A0D9SEW6 157 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 EGFP01133 1207 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 KRT1P04264 644 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 RHOCP08134 193 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 PYGMP11217 842 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 MSNP26038 577 aaKnown RBP13.01□□□□□ -0.33
SYNE2-219ENST00000555323 TARSP26639 723 aaKnown RBP13.01□□□□□ -0.33
SYNE2-219ENST00000555323 MZF1P28698 734 aaPredicted RBP13.01□□□□□ -0.33
SYNE2-219ENST00000555323 ETFBP38117 255 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 CSKP41240 450 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 KIR2DL1P43626 348 aaPredicted RBP13.01□□□□□ -0.33
SYNE2-219ENST00000555323 GNA12Q03113 381 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 PAFAH1B3Q15102 231 aaKnown RBP13.01□□□□□ -0.33
SYNE2-219ENST00000555323 RPS6KA1Q15418 735 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 PLEKHG6Q3KR16 790 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 ODF2Q5BJF6 829 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 ZNF569Q5MCW4 686 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 SLC9A4Q6AI14 798 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 SPOCD1Q6ZMY3 1216 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 APCDD1Q8J025 514 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 CCDC26Q8TAB7 109 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 ARHGEF2Q92974 986 aaKnown RBP13.01□□□□□ -0.33
SYNE2-219ENST00000555323 ACDQ96AP0 544 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 CLDN23Q96B33 292 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 TBC1D17Q9HA65 648 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 ETNK2Q9NVF9 386 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 ELOVL2Q9NXB9 296 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 DNAI1Q9UI46 699 aa13.01□□□□□ -0.33
SYNE2-219ENST00000555323 hCG_1818297A0A087WSY0 165 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 TMEM221A6NGB7 291 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 FAM170BA6NMN3 283 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 M0R296 226 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 NPC1O15118 1278 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 NCAM2O15394 837 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms