RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 KRT83P78385 493 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 PTPRNQ16849 979 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 PLK5Q496M5 336 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 C5orf22Q49AR2 442 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 PPP1R15BQ5SWA1 713 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 CCDC122Q5T0U0 273 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 PLEKHA7Q6IQ23 1121 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 CXorf57Q6NSI4 855 aaKnown RBP12.44□□□□□ -0.42
SRP54-206ENST00000555317 SARM1Q6SZW1 724 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 SLC36A4Q6YBV0 504 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 LPCAT2Q7L5N7 544 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 SETD3Q86TU7 594 aaPredicted RBP12.44□□□□□ -0.42
SRP54-206ENST00000555317 CACUL1Q86Y37 369 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 TMPRSS6Q8IU80 811 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 DRC7Q8IY82 874 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 APCDD1Q8J025 514 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 CCDC185Q8N715 623 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 ZNF366Q8N895 744 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 KDM1BQ8NB78 822 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 OR2T3Q8NH03 318 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 OLIG1Q8TAK6 271 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 RLN3Q8WXF3 142 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 NTAN1Q96AB6 310 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 TBC1D31Q96DN5 1066 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 SIPA1Q96FS4 1042 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 LOXL4Q96JB6 756 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 LMLNQ96KR4 655 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 MRGPRX1Q96LB2 322 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 DNAJC7Q99615 494 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 EPAS1Q99814 870 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 ANP32EQ9BTT0 268 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 C2orf49Q9BVC5 232 aaPredicted RBP12.44□□□□□ -0.42
SRP54-206ENST00000555317 OSBPL2Q9H1P3 480 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 MPP6Q9NZW5 540 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 PPARGC1AQ9UBK2 798 aaKnown RBP12.44□□□□□ -0.42
SRP54-206ENST00000555317 USP18Q9UMW8 372 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 CYP8B1Q9UNU6 501 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 CEP250Q9BV73 2442 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 MUC22E2RYF6 1773 aaPredicted RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 IGLV3-10A0A075B6K4 115 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 EDDM13A0A1B0GTR0 161 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 DRGXA6NNA5 263 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 I6L893 689 aaPredicted RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 AP5Z1O43299 807 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 AKR1B10O60218 316 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 LRP3O75074 770 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 MFAP3LO75121 409 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 HNRNPH3P31942 346 aaKnown RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 ETFBP38117 255 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 EIF4A3P38919 411 aaKnown RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 CTSOP43234 321 aaPredicted RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 DHPSP49366 369 aaPredicted RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 NUMBP49757 651 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 NRG1Q02297 640 aaPredicted RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 RPL6Q02878 288 aaKnown RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 SCAPQ12770 1279 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 CAMK2GQ13555 558 aaPredicted RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 TTC31Q49AM3 519 aaPredicted RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 RAB6CQ53S08 254 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 ALFQ53S48 1182 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 ALKBH5Q6P6C2 394 aaKnown RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 DNAAF5Q86Y56 855 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 FNIP1Q8TF40 1166 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 ZC3H10Q96K80 434 aaKnown RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 RPL10LQ96L21 214 aaKnown RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 NCAPGQ9BPX3 1015 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 FEM1AQ9BSK4 669 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 ISCUQ9H1K1 167 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 SLC6A17Q9H1V8 727 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 TMEM245Q9H330 911 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 RETREG1Q9H6L5 497 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 ABHD10Q9NUJ1 306 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 INTS6Q9UL03 887 aaKnown RBP12.43□□□□□ -0.42
SRP54-206ENST00000555317 TBC1D30Q9Y2I9 924 aa12.43□□□□□ -0.42
SRP54-206ENST00000555317 NUP205Q92621 2012 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 A0A087X0T9 212 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 ILVBLA1L0T0 632 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 TMEM191CA6NGB0 347 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 AKR1B15C9JRZ8 316 aaPredicted RBP12.42□□□□□ -0.42
SRP54-206ENST00000555317 PRPSAP2O60256 369 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 EPN2O95208 641 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 DNTTP04053 509 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 FAM228BP0C875 321 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 BCKDHBP21953 392 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 OXTRP30559 389 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 MAPKAPK2P49137 400 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 STK19P49842 368 aaPredicted RBP12.42□□□□□ -0.42
SRP54-206ENST00000555317 PLK1P53350 603 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 ADKP55263 362 aaKnown RBP12.42□□□□□ -0.42
SRP54-206ENST00000555317 CREB5Q02930 508 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 SPEM2Q0P670 501 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 SFSWAPQ12872 951 aaKnown RBP12.42□□□□□ -0.42
SRP54-206ENST00000555317 HNRNPA1L2Q32P51 320 aaKnown RBP12.42□□□□□ -0.42
SRP54-206ENST00000555317 MAP7D1Q3KQU3 841 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 ACCSLQ4AC99 568 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 PMS2CLQ68D20 193 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 ZNF776Q68DI1 518 aaPredicted RBP12.42□□□□□ -0.42
SRP54-206ENST00000555317 ZNF783Q6ZMS7 281 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 CYP2U1Q7Z449 544 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms