RNA–Protein interactions for RNA: ENST00000555164.2

KTN1-219, Transcript of kinectin 1, humanhuman

TSL 4

Gene KTN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-219ENST00000555164 KCND3Q9UK17 655 aa4.32□□□□□ -1.72
KTN1-219ENST00000555164 DNAJC16Q9Y2G8 782 aa4.32□□□□□ -1.72
KTN1-219ENST00000555164 DERAQ9Y315 318 aa4.32□□□□□ -1.72
KTN1-219ENST00000555164 LOC105369274A0A096LPK9 316 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 LOC102723532A0A0G2JNH3 316 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 CCDC196A0A1B0GTZ2 297 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 KIF28PB7ZC32 967 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 F5H0A9 414 aaPredicted RBP4.31□□□□□ -1.72
KTN1-219ENST00000555164 CTIFO43310 598 aaKnown RBP4.31□□□□□ -1.72
KTN1-219ENST00000555164 SMAD6O43541 496 aaKnown RBP4.31□□□□□ -1.72
KTN1-219ENST00000555164 KRT38O76015 456 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 CER1O95813 267 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 SERPINA4P29622 427 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 MCM2P49736 904 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 IRX6P78412 446 aaPredicted RBP4.31□□□□□ -1.72
KTN1-219ENST00000555164 HSF1Q00613 529 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 SF3A3Q12874 501 aaKnown RBP eCLIP4.31□□□□□ -1.72
KTN1-219ENST00000555164 CSHL1Q14406 222 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 KCTD2Q14681 263 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 DAB2IPQ5VWQ8 1189 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 DGAT2L7PQ6IED9 249 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 COLCA1Q6ZS62 124 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 PIK3AP1Q6ZUJ8 805 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 SYT13Q7L8C5 426 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 OR4N4Q8N0Y3 316 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 METTL25Q8N6Q8 603 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 NGDNQ8NEJ9 315 aaKnown RBP4.31□□□□□ -1.72
KTN1-219ENST00000555164 RFFLQ8WZ73 363 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 ST8SIA4Q92187 359 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 CPT1BQ92523 772 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 CENPIQ92674 756 aaPredicted RBP4.31□□□□□ -1.72
KTN1-219ENST00000555164 GOLGA1Q92805 767 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 CTHRC1Q96CG8 243 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 GPR63Q9BZJ6 419 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 HIPK2Q9H2X6 1198 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 NOD2Q9HC29 1040 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 PREBQ9HCU5 417 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 TBC1D22BQ9NU19 505 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 NFU1Q9UMS0 254 aa4.31□□□□□ -1.72
KTN1-219ENST00000555164 LAS1LQ9Y4W2 734 aaKnown RBP4.31□□□□□ -1.72
KTN1-219ENST00000555164 VWA3AA6NCI4 1184 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 SLC38A8A6NNN8 435 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 SPRY2O43597 315 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 WDR47O94967 919 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 LARGE1O95461 756 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 HNRNPA1P09651 372 aaKnown RBP eCLIP4.3□□□□□ -1.72
KTN1-219ENST00000555164 PBX1P40424 430 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 DCAF7P61962 342 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.3□□□□□ -1.72
KTN1-219ENST00000555164 RPS6KA2Q15349 733 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 TMEM196Q5HYL7 178 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 FAM90A2PQ658T7 463 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 ATG16L1Q676U5 607 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 C16orf54Q6UWD8 224 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 CLEC9AQ6UXN8 241 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 RASGRP2Q7LDG7 609 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 USP38Q8NB14 1042 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 SLC22A17Q8WUG5 538 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 HMGB4Q8WW32 186 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 KTI12Q96EK9 354 aaPredicted RBP4.3□□□□□ -1.72
KTN1-219ENST00000555164 THOC3Q96J01 351 aaKnown RBP4.3□□□□□ -1.72
KTN1-219ENST00000555164 HIC2Q96JB3 615 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 PAIP1Q9H074 479 aaKnown RBP4.3□□□□□ -1.72
KTN1-219ENST00000555164 BRD8Q9H0E9 1235 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 VPS33BQ9H267 617 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 KCNK9Q9NPC2 374 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 MGAT4CQ9UBM8 478 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 ZNF112Q9UJU3 913 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 ZBTB1Q9Y2K1 713 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 SLC45A1Q9Y2W3 748 aa4.3□□□□□ -1.72
KTN1-219ENST00000555164 RRP7AQ9Y3A4 280 aaKnown RBP4.3□□□□□ -1.72
KTN1-219ENST00000555164 A0A087X0M5 115 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 A0A1B0GX30 115 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 DYTNA2CJ06 578 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 A6NCN8 305 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 STX16-NPEPL1H3BU86 382 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 M0QZQ0 153 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 STX16O14662 325 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 TIMM44O43615 452 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 HSP90AA1P07900 732 aaKnown RBP4.29□□□□□ -1.72
KTN1-219ENST00000555164 T-ENOLP0DO92 83 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 TACR3P29371 465 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 FAM3BP58499 235 aaPredicted RBP4.29□□□□□ -1.72
KTN1-219ENST00000555164 YPEL5P62699 121 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 CFHR3Q02985 330 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 DCTN1Q14203 1278 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 ANKRD1Q15327 319 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 AASDHQ4L235 1098 aaPredicted RBP4.29□□□□□ -1.72
KTN1-219ENST00000555164 CTXN3Q4LDR2 81 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 ACAD10Q6JQN1 1059 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 ZNF793Q6ZN11 406 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 RINLQ6ZS11 566 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 NEK10Q6ZWH5 1172 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 UBE2Q1Q7Z7E8 422 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 TTC30AQ86WT1 665 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 FSTL5Q8N475 847 aaPredicted RBP4.29□□□□□ -1.72
KTN1-219ENST00000555164 TCP11L2Q8N4U5 519 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 C11orf44Q8N8P7 122 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 ZUFSPQ96AP4 578 aa4.29□□□□□ -1.72
KTN1-219ENST00000555164 WDYHV1Q96HA8 205 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms