RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 SOWAHCQ53LP3 525 aaPredicted RBP11.46□□□□□ -0.57
SRP54-205ENST00000554803 PLA2G2CQ5R387 149 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 DCUN1D2Q6PH85 259 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 ADGRD1Q6QNK2 874 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 BBS12Q6ZW61 710 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 OR5B17Q8NGF7 314 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 UHMK1Q8TAS1 419 aaKnown RBP11.46□□□□□ -0.57
SRP54-205ENST00000554803 SLC35B2Q8TB61 432 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 MGARPQ8TDB4 240 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 NSMCE1Q8WV22 266 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 CPA5Q8WXQ8 436 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 ATG4AQ8WYN0 398 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 FAM3CQ92520 227 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 ELSPBP1Q96BH3 223 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 C11orf70Q9BRQ4 267 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 SIKE1Q9BRV8 207 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 SCNM1Q9BWG6 230 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 TRIM6Q9C030 488 aaPredicted RBP11.46□□□□□ -0.57
SRP54-205ENST00000554803 NIF3L1Q9GZT8 377 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 ACSS3Q9H6R3 686 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 RPF1Q9H9Y2 349 aaKnown RBP11.46□□□□□ -0.57
SRP54-205ENST00000554803 RNPEPL1Q9HAU8 725 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 ETNK1Q9HBU6 452 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 GDE1Q9NZC3 331 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 KLK14Q9P0G3 267 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 R3HDM2Q9Y2K5 976 aaKnown RBP11.46□□□□□ -0.57
SRP54-205ENST00000554803 GIT1Q9Y2X7 761 aa11.46□□□□□ -0.57
SRP54-205ENST00000554803 TCRBV5S1A1TA0A578 114 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 CFAP69A5D8W1 941 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 RECQL4O94761 1208 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 TOP3BO95985 862 aaKnown RBP11.45□□□□□ -0.58
SRP54-205ENST00000554803 NFICP08651 508 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 CALB2P22676 271 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 CA4P22748 312 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 PTPN4P29074 926 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 STIP1P31948 543 aaKnown RBP11.45□□□□□ -0.58
SRP54-205ENST00000554803 CDKN2BP42772 138 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 WDR4P57081 412 aaKnown RBP11.45□□□□□ -0.58
SRP54-205ENST00000554803 TAS2R40P59535 323 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 KCNJ2P63252 427 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 PDE4CQ08493 712 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 MYO1EQ12965 1108 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 GPS1Q13098 491 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 NCOA4Q13772 614 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 MPP2Q14168 576 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 E2F5Q15329 346 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 KYAT1Q16773 422 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 PABPC1LQ4VXU2 614 aaKnown RBP11.45□□□□□ -0.58
SRP54-205ENST00000554803 PPP1R15BQ5SWA1 713 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 LGSNQ5TDP6 509 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 HEATR6Q6AI08 1181 aaKnown RBP11.45□□□□□ -0.58
SRP54-205ENST00000554803 TANGO2Q6ICL3 276 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 JADE1Q6IE81 842 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 TMEM270Q6UE05 265 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 WDR5BQ86VZ2 330 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 LMNTD2Q8IXW0 634 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 PDIK1LQ8N165 341 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 AGAP11Q8TF27 550 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 ING5Q8WYH8 240 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 PRCCQ92733 491 aaPredicted RBP11.45□□□□□ -0.58
SRP54-205ENST00000554803 ELMO3Q96BJ8 720 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 KIF12Q96FN5 646 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 ACAP3Q96P50 834 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 CYTH2Q99418 400 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 CLSTN3Q9BQT9 956 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 COLEC11Q9BWP8 271 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 DCLRE1BQ9H816 532 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 BRD9Q9H8M2 597 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 MKS1Q9NXB0 559 aa11.45□□□□□ -0.58
SRP54-205ENST00000554803 MTO1Q9Y2Z2 717 aaKnown RBP11.45□□□□□ -0.58
SRP54-205ENST00000554803 FARP1Q9Y4F1 1045 aaPredicted RBP11.45□□□□□ -0.58
SRP54-205ENST00000554803 PI4KAP42356 2102 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 SIGLEC16A6NMB1 481 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 ZNF487B1APH4 448 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 CCDC22O60826 627 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 IL18RAPO95256 599 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 VNN1O95497 513 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 KRT16P08779 473 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 PECAM1P16284 738 aaPredicted RBP11.44□□□□□ -0.58
SRP54-205ENST00000554803 DESP17661 470 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 HOXA6P31267 233 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 RAP1GAPP47736 663 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 MRPS35P82673 323 aaKnown RBP11.44□□□□□ -0.58
SRP54-205ENST00000554803 KRT72Q14CN4 511 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 DUOXA2Q1HG44 320 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 POTEHQ6S545 545 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 APBB1IPQ7Z5R6 666 aaPredicted RBP11.44□□□□□ -0.58
SRP54-205ENST00000554803 ERICH1Q86X53 443 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.44□□□□□ -0.58
SRP54-205ENST00000554803 GDAP1Q8TB36 358 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 STK32AQ8WU08 396 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 PYROXD1Q8WU10 500 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 C10orf82Q8WW14 230 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 ZNF606Q8WXB4 792 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 IRF7Q92985 503 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 LRRC39Q96DD0 335 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 MCRS1Q96EZ8 462 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 ZMAT2Q96NC0 199 aaKnown RBP11.44□□□□□ -0.58
SRP54-205ENST00000554803 TRIM55Q9BYV6 548 aa11.44□□□□□ -0.58
SRP54-205ENST00000554803 MTMR12Q9C0I1 747 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms