RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ZNF677Q86XU0 584 aa12.85□□□□□ -0.35
SHMT2-214ENST00000554604 SPATA4Q8NEY3 305 aa12.85□□□□□ -0.35
SHMT2-214ENST00000554604 SLC35G2Q8TBE7 412 aa12.85□□□□□ -0.35
SHMT2-214ENST00000554604 ADAM32Q8TC27 787 aa12.85□□□□□ -0.35
SHMT2-214ENST00000554604 RTKNQ9BST9 563 aa12.85□□□□□ -0.35
SHMT2-214ENST00000554604 SMOC1Q9H4F8 434 aa12.85□□□□□ -0.35
SHMT2-214ENST00000554604 SEPT11Q9NVA2 429 aaKnown RBP12.85□□□□□ -0.35
SHMT2-214ENST00000554604 CALCOCO1Q9P1Z2 691 aa12.85□□□□□ -0.35
SHMT2-214ENST00000554604 CLEC4EQ9ULY5 219 aa12.85□□□□□ -0.35
SHMT2-214ENST00000554604 PCDHGC3Q9UN70 934 aa12.85□□□□□ -0.35
SHMT2-214ENST00000554604 RAD54BQ9Y620 910 aa12.85□□□□□ -0.35
SHMT2-214ENST00000554604 STON1Q9Y6Q2 735 aa12.85□□□□□ -0.35
SHMT2-214ENST00000554604 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 BCLAF3A2AJT9 711 aaKnown RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 TMCO5BA8MYB1 307 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 GDF9O60383 454 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 SYNCRIPO60506 623 aaKnown RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 TBL1XO60907 577 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 ZNF217O75362 1048 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 MOCS2O96007 188 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 APOEP02649 317 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 FTLP02792 175 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 NDUFV2P19404 249 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 CXCR5P32302 372 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 ATXN1P54253 815 aaKnown RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 C2orf54Q08AI8 447 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 LONRF2Q1L5Z9 754 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 MAP7D1Q3KQU3 841 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 GLE1Q53GS7 698 aaKnown RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 DCAF6Q58WW2 860 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 PLA2G2CQ5R387 149 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 PIK3R6Q5UE93 754 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 SYPL2Q5VXT5 272 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 KIAA1324Q6UXG2 1013 aaKnown RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 SERPINA13PQ6UXR4 307 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 SLC36A4Q6YBV0 504 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 BEND5Q7L4P6 421 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 TAC4Q86UU9 113 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 NT5DC3Q86UY8 548 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 DNAAF5Q86Y56 855 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 CCDC117Q8IWD4 279 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 TMEFF1Q8IYR6 380 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 FRMD1Q8N878 549 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 ZNF557Q8N988 423 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 C1orf131Q8NDD1 294 aaKnown RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 WFIKKN2Q8TEU8 576 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 DDX1Q92499 740 aaKnown RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 AZIN2Q96A70 460 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 FCRL2Q96LA5 508 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 CPXM1Q96SM3 734 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 PCDHB18PQ96TA0 734 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 SELENOOQ9BVL4 669 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 THAP2Q9H0W7 228 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 LHX5Q9H2C1 402 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 FAM204AQ9H8W3 233 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 ABCB8Q9NUT2 735 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 TAS2R14Q9NYV8 317 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 STIM2Q9P246 746 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 THAP10Q9P2Z0 257 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-214ENST00000554604 AMFRQ9UKV5 643 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 PLA2G4CQ9UP65 541 aa12.84□□□□□ -0.35
SHMT2-214ENST00000554604 GOLGA6L7A0A1B0GV03 622 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 TRUB2O95900 331 aaKnown RBP12.83□□□□□ -0.36
SHMT2-214ENST00000554604 GLI1P08151 1106 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 ABCB4P21439 1286 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 HLA-FP30511 346 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 SLC6A4P31645 630 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 IL12RB1P42701 662 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 VSNL1P62760 191 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 RPL6Q02878 288 aaKnown RBP12.83□□□□□ -0.36
SHMT2-214ENST00000554604 ZNF234Q14588 700 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 TAF5Q15542 800 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 FAM133BQ5BKY9 247 aaKnown RBP12.83□□□□□ -0.36
SHMT2-214ENST00000554604 EFHC1Q5JVL4 640 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 BEND6Q5SZJ8 279 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-214ENST00000554604 MPP7Q5T2T1 576 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 IL31Q6EBC2 164 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 OR6B2Q6IFH4 312 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 C11orf63Q6NUN7 778 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 CHST9Q7L1S5 443 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 ARMCX6Q7L4S7 300 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 DAAM2Q86T65 1068 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 WDTC1Q8N5D0 677 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 HJURPQ8NCD3 748 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-214ENST00000554604 ACTRT1Q8TDG2 376 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 SORCS1Q8WY21 1168 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 PIGKQ92643 395 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 RNF34Q969K3 372 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 ARHGEF26Q96DR7 871 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 HES6Q96HZ4 224 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 TJP2Q9UDY2 1190 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 SLC12A6Q9UHW9 1150 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 MBD1Q9UIS9 605 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-214ENST00000554604 GGA2Q9UJY4 613 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 CYP8B1Q9UNU6 501 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 CACNA1EQ15878 2313 aa12.83□□□□□ -0.36
SHMT2-214ENST00000554604 ASCC3Q8N3C0 2202 aaKnown RBP12.82□□□□□ -0.36
SHMT2-214ENST00000554604 ADAMTS9Q9P2N4 1935 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 NUMA1Q14980 2115 aa12.82□□□□□ -0.36
SHMT2-214ENST00000554604 SYNJ2BP-COX16A0A087WUM0 186 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms