RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 PLA2G4CQ9UP65 541 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 MYBPHLA2RUH7 354 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 DPPA5A6NC42 116 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 DCLK1O15075 740 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 TM7SF2O76062 418 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 FYNP06241 537 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 GRB14Q14449 540 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 USP50Q70EL3 339 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 ACVR1CQ8NER5 493 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 LPPQ93052 612 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 MS4A4AQ96JQ5 239 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 SORT1Q99523 831 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 CHRAC1Q9NRG0 131 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 TMEM30AQ9NV96 361 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 BFARQ9NZS9 450 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 RCOR3Q9P2K3 495 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 STX18Q9P2W9 335 aaKnown RBP16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 PTGESO14684 152 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 MAP3K7O43318 606 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 SIN3BO75182 1162 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 F2P00734 622 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 CPA3P15088 417 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 GCKP35557 465 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 IDH3AP50213 366 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 ZBTB17Q13105 803 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 CFAP157Q5JU67 520 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 OLFML2BQ68BL8 750 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 FSTL4Q6MZW2 842 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 KBTBD2Q8IY47 623 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 ACMSDQ8TDX5 336 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 RNF34Q969K3 372 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 ANKRD27Q96NW4 1050 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 GORASP1Q9BQQ3 440 aa16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 EIF2B3Q9NR50 452 aaKnown RBP16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 IARS2Q9NSE4 1012 aaKnown RBP16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 C20orf96Q9NUD7 363 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF40-203ENST00000554514 E9PBE3 544 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 KLHL41O60662 606 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 MAGEC1O60732 1142 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 NFKB1P19838 968 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 WARSP23381 471 aaKnown RBP16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 KLC1Q07866 573 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 TUBB3Q13509 450 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 LRRC36Q1X8D7 754 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 FAM91A1Q658Y4 838 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 ZNF467Q7Z7K2 595 aaPredicted RBP16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 PSTKQ8IV42 348 aaKnown RBP16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 SENP8Q96LD8 212 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 UNKQ9C0B0 810 aaKnown RBP16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 LRRC40Q9H9A6 602 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 DLGAP2Q9P1A6 1054 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 CPA4Q9UI42 421 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 SHROOM3Q8TF72 1996 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 HSPA4LO95757 839 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 SRGAP2BP0DMP2 458 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 KCNE1P15382 129 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 MX2P20592 715 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 PSEN2P49810 448 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 RAP1GDS1P52306 607 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 ABCE1P61221 599 aaKnown RBP16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 PAFAH1B3Q15102 231 aaKnown RBP16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 DNAL1Q4LDG9 190 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 PDPK2PQ6A1A2 396 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 CPNE1Q99829 537 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 RALGAPA2Q2PPJ7 1873 aa16.04■□□□□ 0.16
ARHGEF40-203ENST00000554514 A0A096LPK6 155 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 GOLGA8QA0A0J9YX86 632 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 GOLGA8OA6NCC3 632 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 GOLGA8NF8WBI6 632 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 CTSHP09668 335 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 HOXD8P13378 290 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 AVPR1AP37288 418 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 SPANXN3Q5MJ09 141 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 NAPRTQ6XQN6 538 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 RAPH1Q70E73 1250 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 CCNJLQ8IV13 435 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 ZNF781Q8N8C0 355 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 GTF3C2Q8WUA4 911 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 PYDC1Q8WXC3 89 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 PCED1BQ96HM7 432 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 GAD1Q99259 594 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 SMOQ99835 787 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 SYT15Q9BQS2 421 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 IGSF9Q9P2J2 1179 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 PACSIN3Q9UKS6 424 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 PPM1HQ9ULR3 514 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 SOX13Q9UN79 622 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 CASTOR2A6NHX0 329 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 NEMP1O14524 444 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 DCXO43602 365 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 JCHAINP01591 159 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 SKIP12755 728 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 ANPEPP15144 967 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 CCR10P46092 362 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 GLRBP48167 497 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 RWDD4Q6NW29 188 aaKnown RBP16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 CYS1Q717R9 158 aa16.03■□□□□ 0.16
ARHGEF40-203ENST00000554514 KDELC2Q7Z4H8 507 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms