RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 C6orf163Q5TEZ5 329 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 KIAA0319Q5VV43 1072 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 FSTL4Q6MZW2 842 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 PAQR9Q6ZVX9 377 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 GPRIN1Q7Z2K8 1008 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 STRA8Q7Z7C7 330 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 DEFB107AQ8IZN7 70 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 CRYBG2Q8N1P7 616 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 SLC26A7Q8TE54 656 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 MFSD3Q96ES6 412 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 OR52B2Q96RD2 323 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 NPY6RQ99463 290 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 SIKE1Q9BRV8 207 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 COG4Q9H9E3 785 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 PLEKHA5Q9HAU0 1116 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 TMEM30AQ9NV96 361 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 DCDC2Q9UHG0 476 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 GOLGA8QA0A0J9YX86 632 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 SMIM28A0A1B0GU29 152 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 GOLGA8OA6NCC3 632 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 MAGEA13PA6NCF6 341 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 GOLGA8NF8WBI6 632 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 TK2O00142 265 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 EEF2KO00418 725 aaKnown RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 CXCL11O14625 94 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 PPP1R12AO14974 1030 aaPredicted RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 XPO1O14980 1071 aaKnown RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 AHCYL1O43865 530 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 TOMM70O94826 608 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 SNAI1O95863 264 aaPredicted RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 ATP5BP06576 529 aaKnown RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 POLBP06746 335 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 CPA3P15088 417 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 MPSTP25325 297 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 CD68P34810 354 aaPredicted RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 LIMK2P53671 638 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 PPIL2Q13356 520 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 TTLL12Q14166 644 aaPredicted RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 PAFAH1B3Q15102 231 aaKnown RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 HSP90AA5PQ58FG0 334 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 CERCAMQ5T4B2 595 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 PID1Q7Z2X4 250 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 CLEC14AQ86T13 490 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 ZNF410Q86VK4 478 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 PDSS2Q86YH6 399 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 ANKRD13AQ8IZ07 590 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 B3GALNT2Q8NCR0 500 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 ARRDC4Q8NCT1 418 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 ACTRT2Q8TDY3 377 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 PPP4R1Q8TF05 950 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 NT5C3BQ969T7 300 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 ISL2Q96A47 359 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 LENG1Q96BZ8 264 aaPredicted RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 CDCA5Q96FF9 252 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 VCXQ9H320 206 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 SNX25Q9H3E2 840 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 STN1Q9H668 368 aaKnown RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 PRDM16Q9HAZ2 1276 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 KLHL8Q9P2G9 620 aaPredicted RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 CPSF2Q9P2I0 782 aaKnown RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 IGSF9Q9P2J2 1179 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 RCOR3Q9P2K3 495 aaPredicted RBP7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 SORCS3Q9UPU3 1222 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 POMPQ9Y244 141 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 PCDHB12Q9Y5F1 795 aa7.09□□□□□ -1.27
LINC-ROR-201ENST00000553704 A0A096LPK6 155 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 H3BNX3 289 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 NEMP1O14524 444 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZBTB24O43167 697 aaPredicted RBP7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 FKBP6O75344 327 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 STK10O94804 968 aaKnown RBP7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 KLHL2O95198 593 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 JUNP05412 331 aaKnown RBP7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 ERCC2P18074 760 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 GRIA2P42262 883 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 SERPINB8P50452 374 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 DEUP1Q05D60 604 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 TBL3Q12788 808 aaKnown RBP7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 IFRD2Q12894 506 aaPredicted RBP7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 NAB1Q13506 487 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 PDK1Q15118 436 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 ZRSR2Q15696 482 aaKnown RBP7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 GSTA3Q16772 222 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 SPANXN3Q5MJ09 141 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 FAM219BQ5XKK7 198 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 CLEC20AQ6ZU45 233 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 ATP2A3Q93084 1043 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 EMID1Q96A84 441 aaPredicted RBP7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 DCPSQ96C86 337 aaKnown RBP7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 HSFY1Q96LI6 401 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 CPNE1Q99829 537 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 SGIP1Q9BQI5 828 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 CDH19Q9H159 772 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 WDR55Q9H6Y2 383 aaPredicted RBP7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 VTA1Q9NP79 307 aa7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 SPATS2LQ9NUQ6 558 aaKnown RBP7.08□□□□□ -1.28
LINC-ROR-201ENST00000553704 UBP1Q9NZI7 540 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms