RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ANKRD20A3Q5VUR7 823 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 ANKRD22Q5VYY1 191 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 HFE2Q6ZVN8 426 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 TAC4Q86UU9 113 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 NLRP14Q86W24 1093 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 CCDC13Q8IYE1 715 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 TNS4Q8IZW8 715 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 PDZD8Q8NEN9 1154 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 OVCA2Q8WZ82 227 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 RNF34Q969K3 372 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 MTBPQ96DY7 904 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 CHMP6Q96FZ7 201 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 P2RY11Q96G91 374 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 DEFB118Q96PH6 123 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 TSGA13Q96PP4 275 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 XPO6Q96QU8 1125 aaKnown RBP7.51□□□□□ -1.21
ATXN3-221ENST00000553498 SMC6Q96SB8 1091 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 HIPK3Q9H422 1215 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 RUBCNLQ9H714 662 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 TMLHEQ9NVH6 421 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 OR12D3Q9UGF7 316 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 TLR6Q9Y2C9 796 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 BACE2Q9Y5Z0 518 aa7.51□□□□□ -1.21
ATXN3-221ENST00000553498 COL4A4P53420 1690 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-221ENST00000553498 FAM47DPA6NHR8 397 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 SDR42E2A6NKP2 422 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 SMIM23A6NLE4 172 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 RASA4BC9J798 803 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 RNF103O00237 685 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 RASA4O43374 803 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 MFSD11O43934 449 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 KRT37O76014 449 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 SUN1O94901 812 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 CPP00450 1065 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 ITGB1P05556 798 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 GALTP07902 379 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 CCL5P13501 91 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 BRAFP15056 766 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 CHN1P15882 459 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 PRKCHP24723 683 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 CCNCP24863 283 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 EPHB2P29323 1055 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 SLCO1A2P46721 670 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 TUFMP49411 452 aaKnown RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 SERPINB9P50453 376 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 GPX6P59796 221 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 IL9RQ01113 521 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 AP1B1Q10567 949 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 IFRD2Q12894 506 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 ILF2Q12905 390 aaKnown RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 IKBKEQ14164 716 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 PRPSAP1Q14558 356 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 LBRQ14739 615 aaKnown RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 GPNMBQ14956 572 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 GKAP1Q5VSY0 366 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 FAM171A1Q5VUB5 890 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 SLC8B1Q6J4K2 584 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 TIGD7Q6NT04 549 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 FUT10Q6P4F1 479 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 LRRC8BQ6P9F7 803 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 CNKSR3Q6P9H4 555 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 SLC39A5Q6ZMH5 540 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 DENND5BQ6ZUT9 1274 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 YTHDF3Q7Z739 585 aaKnown RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 PRUNE1Q86TP1 453 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 TRABD2AQ86V40 505 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 SLC26A11Q86WA9 606 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 KLHDC8BQ8IXV7 354 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 PYROXD2Q8N2H3 581 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 COLGALT1Q8NBJ5 622 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 SH3TC2Q8TF17 1288 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 HASPINQ8TF76 798 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 DYDC1Q8WWB3 177 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 ATXN2LQ8WWM7 1075 aaKnown RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 NDRG1Q92597 394 aaKnown RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 TTC17Q96AE7 1141 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 GRAMD1AQ96CP6 724 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 TBC1D31Q96DN5 1066 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 PWWP2AQ96N64 755 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 CCT8L2Q96SF2 557 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 EBNA1BP2Q99848 306 aaKnown RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 SELENOSQ9BQE4 189 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 PLCD4Q9BRC7 762 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 TTPALQ9BTX7 342 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 RNF208Q9H0X6 261 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 PRDM12Q9H4Q4 367 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 TLR8Q9NR97 1041 aaKnown RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 NDFIP2Q9NV92 336 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 TMEM30AQ9NV96 361 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 HAUS2Q9NVX0 235 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 PPARGC1AQ9UBK2 798 aaKnown RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 CACNG4Q9UBN1 327 aa7.5□□□□□ -1.21
ATXN3-221ENST00000553498 PRG3Q9Y2Y8 225 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.5□□□□□ -1.21
ATXN3-221ENST00000553498 ABHD14A-ACY1A0A1B0GW23 586 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 TCRBV7S3A2A0A539 114 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 TCRBV9S1A1TA0A576 114 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 TMEM120BA0PK00 339 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 ERICH4A6NGS2 130 aa7.49□□□□□ -1.21
ATXN3-221ENST00000553498 KCNU1A8MYU2 1149 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms