RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SPRED3Q2MJR0 410 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 KCNT1Q5JUK3 1230 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 TMEM215Q68D42 235 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 DHRS13Q6UX07 377 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 LAYNQ6UX15 382 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 SCARA5Q6ZMJ2 495 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 CACUL1Q86Y37 369 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 SLC2A14Q8TDB8 520 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 IGSF8Q969P0 613 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 SYAP1Q96A49 352 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-219ENST00000553488 ELMO3Q96BJ8 720 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 SIPA1Q96FS4 1042 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 ORAI3Q9BRQ5 295 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 MED10Q9BTT4 135 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 FBXO44Q9H4M3 255 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 C6orf106Q9H6K1 298 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-219ENST00000553488 TLR8Q9NR97 1041 aaKnown RBP7.64□□□□□ -1.19
ATXN3-219ENST00000553488 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.64□□□□□ -1.19
ATXN3-219ENST00000553488 LSM7Q9UK45 103 aaKnown RBP7.64□□□□□ -1.19
ATXN3-219ENST00000553488 CLEC4EQ9ULY5 219 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 SCML2Q9UQR0 700 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-219ENST00000553488 SRPRBQ9Y5M8 271 aaKnown RBP7.64□□□□□ -1.19
ATXN3-219ENST00000553488 SNX11Q9Y5W9 270 aa7.64□□□□□ -1.19
ATXN3-219ENST00000553488 MORC2Q9Y6X9 1032 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-219ENST00000553488 UBR5O95071 2799 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-219ENST00000553488 UBE4BO95155 1302 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 A0A1W2PQH9 124 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 H0Y8X5 98 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 PLK4O00444 970 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 VNN1O95497 513 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 GLB1P16278 677 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 ACSL1P33121 698 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 ATP5C1P36542 298 aaKnown RBP7.63□□□□□ -1.19
ATXN3-219ENST00000553488 EIF2S3P41091 472 aaKnown RBP7.63□□□□□ -1.19
ATXN3-219ENST00000553488 STAT6P42226 847 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 CTSKP43235 329 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 CASP4P49662 377 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 CLDN6P56747 220 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 MAP3K7CLP57077 242 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 GOLGA8FQ08AF8 430 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 GOLGA8DPQ0D2H9 430 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 RABEP1Q15276 862 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 ZNF699Q32M78 642 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 PCSK4Q6UW60 755 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 CCDC73Q6ZRK6 1079 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 CLEC20AQ6ZU45 233 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 ANKS1BQ7Z6G8 1248 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 ACOT1Q86TX2 421 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 CCDC65Q8IXS2 484 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 ZNF843Q8N446 348 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 ZNF507Q8TCN5 953 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 SORCS1Q8WY21 1168 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 PRCCQ92733 491 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-219ENST00000553488 CCDC127Q96BQ5 260 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 NXPE2Q96DL1 559 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 TNIP3Q96KP6 325 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 NUP58Q9BVL2 599 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 CLEC4MQ9H2X3 399 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-219ENST00000553488 TM9SF3Q9HD45 589 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 FAM49BQ9NUQ9 324 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 NUDT5Q9UKK9 219 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 ANKRD6Q9Y2G4 727 aa7.63□□□□□ -1.19
ATXN3-219ENST00000553488 COL27A1Q8IZC6 1860 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-219ENST00000553488 LRRIQ3A6PVS8 624 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-219ENST00000553488 C10orf142B7Z368 130 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 KCNK3O14649 394 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 CLIC2O15247 247 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 TSPAN3O60637 253 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 DLGAP3O95886 979 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 EPHX1P07099 455 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 RARGP13631 454 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 HLA-EP13747 358 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 ASPAP45381 313 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 ARL4DP49703 201 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 CYP2J2P51589 502 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 NDST1P52848 882 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 TRPC3Q13507 836 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 CAMK2GQ13555 558 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-219ENST00000553488 EIF4HQ15056 248 aaKnown RBP7.62□□□□□ -1.19
ATXN3-219ENST00000553488 BMT2Q1RMZ1 405 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 ZNF667Q5HYK9 610 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 TMCO4Q5TGY1 634 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 LARP1BQ659C4 914 aaKnown RBP7.62□□□□□ -1.19
ATXN3-219ENST00000553488 CNNM4Q6P4Q7 775 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 STXBP4Q6ZWJ1 553 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 SCD5Q86SK9 330 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 FAM124AQ86V42 546 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 TMPRSS12Q86WS5 348 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 C12orf56Q8IXR9 622 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 FAM217AQ8IXS0 508 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 CRYBG2Q8N1P7 616 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 ZNF276Q8N554 614 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 C12orf29Q8N999 325 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 XXYLT1Q8NBI6 393 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 LSM14AQ8ND56 463 aaKnown RBP7.62□□□□□ -1.19
ATXN3-219ENST00000553488 OR2T3Q8NH03 318 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 SNX19Q92543 992 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 BIRC7Q96CA5 298 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 TWNKQ96RR1 684 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms