RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 MT-CO3P00414 261 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 CALCAP01258 141 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 FYNP06241 537 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 EPB41P11171 864 aaKnown RBP9.39□□□□□ -0.91
SYNE2-209ENST00000553308 ECT2LQ008S8 904 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 KCNH2Q12809 1159 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 LRMPQ12912 555 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 ELAVL3Q14576 367 aaKnown RBP9.39□□□□□ -0.91
SYNE2-209ENST00000553308 EDRF1Q3B7T1 1238 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 DCAF6Q58WW2 860 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 TCERG1LQ5VWI1 586 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 RNF219Q5W0B1 726 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-209ENST00000553308 LCLAT1Q6UWP7 414 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-209ENST00000553308 CCDC117Q8IWD4 279 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-209ENST00000553308 SMYD4Q8IYR2 804 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-209ENST00000553308 LGI2Q8N0V4 545 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 DQX1Q8TE96 717 aaKnown RBP9.39□□□□□ -0.91
SYNE2-209ENST00000553308 SLC35F5Q8WV83 523 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 IRGQQ8WZA9 623 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 CCDC47Q96A33 483 aaKnown RBP9.39□□□□□ -0.91
SYNE2-209ENST00000553308 AZIN2Q96A70 460 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 LGMNQ99538 433 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 DDX50Q9BQ39 737 aaKnown RBP9.39□□□□□ -0.91
SYNE2-209ENST00000553308 ZSWIM1Q9BR11 485 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 CAAP1Q9H8G2 361 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 ASH1LQ9NR48 2969 aaKnown RBP9.39□□□□□ -0.91
SYNE2-209ENST00000553308 ARHGAP20Q9P2F6 1191 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 CYTH4Q9UIA0 394 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 CFAP45Q9UL16 551 aa9.39□□□□□ -0.91
SYNE2-209ENST00000553308 TPX2Q9ULW0 747 aaKnown RBP9.39□□□□□ -0.91
SYNE2-209ENST00000553308 ARID1BQ8NFD5 2236 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-209ENST00000553308 ERVH48-1M5A8F1 160 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 STX10O60499 249 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 MOCS3O95396 460 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 MPOP05164 745 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 CMA1P23946 247 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 BRD2P25440 801 aaKnown RBP9.38□□□□□ -0.91
SYNE2-209ENST00000553308 SYKP43405 635 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 NDUFA8P51970 172 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 YWHAEP62258 255 aaKnown RBP9.38□□□□□ -0.91
SYNE2-209ENST00000553308 DAB2P98082 770 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 POM121L1PQ3SYA9 428 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 TAF1BQ53T94 588 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-209ENST00000553308 RAP1GAP2Q684P5 730 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 ATL3Q6DD88 541 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 PRPF39Q86UA1 669 aaKnown RBP9.38□□□□□ -0.91
SYNE2-209ENST00000553308 TAC4Q86UU9 113 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 CHSY1Q86X52 802 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 CIR1Q86X95 450 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-209ENST00000553308 CACTIN-AS1Q8N1I8 211 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 SLC25A45Q8N413 288 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 ZNF248Q8NDW4 579 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 FAM131CQ96AQ9 280 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 SLC39A13Q96H72 371 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 SERPINB11Q96P15 392 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 SEMA4CQ9C0C4 833 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 MIS12Q9H081 205 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 CPNE5Q9HCH3 593 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 UCKL1Q9NWZ5 548 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 SARDHQ9UL12 918 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 NAALADL1Q9UQQ1 740 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 TLR6Q9Y2C9 796 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 COQ4Q9Y3A0 265 aa9.38□□□□□ -0.91
SYNE2-209ENST00000553308 FLNBO75369 2602 aaKnown RBP9.37□□□□□ -0.91
SYNE2-209ENST00000553308 PYCARD-AS1I3L0S3 204 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 RNF225M0QZC1 329 aaPredicted RBP9.37□□□□□ -0.91
SYNE2-209ENST00000553308 CETN3O15182 167 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 FFAR2O15552 330 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 PLRG1O43660 514 aaKnown RBP9.37□□□□□ -0.91
SYNE2-209ENST00000553308 PAEPP09466 180 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 PDGFRAP16234 1089 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 TACR2P21452 398 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 PCBP4P57723 403 aaKnown RBP9.37□□□□□ -0.91
SYNE2-209ENST00000553308 GABREP78334 506 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 E2F1Q01094 437 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 CNTN1Q12860 1018 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 OVGP1Q12889 678 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 ZNF211Q13398 564 aaPredicted RBP9.37□□□□□ -0.91
SYNE2-209ENST00000553308 NNTQ13423 1086 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 STAT4Q14765 748 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 ARHGAP40Q5TG30 622 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 AGBL4Q5VU57 503 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 TMEM270Q6UE05 265 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 IQCHQ86VS3 1027 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 TRIM69Q86WT6 500 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 FRS2Q8WU20 508 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 KAT5Q92993 513 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 FAM149B1Q96BN6 582 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 HIC2Q96JB3 615 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 SPAG5Q96R06 1193 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 MYOCQ99972 504 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 KIAA1257Q9ULG3 409 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 DMTF1Q9Y222 760 aa9.37□□□□□ -0.91
SYNE2-209ENST00000553308 DOCK9Q9BZ29 2069 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 A0A1B0GVM2 712 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 PRAMEF26H0Y7S4 382 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 SLC7A4O43246 635 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 OPA1O60313 960 aa9.36□□□□□ -0.91
SYNE2-209ENST00000553308 MAGEC1O60732 1142 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms